Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Gm36967-201ENSMUST00000193814 266 ntBASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh11xF6ZNL5 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh11xF6ZNL5 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.19■□□□□ 0.5
Pcdh11xF6ZNL5 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh11xF6ZNL5 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh11xF6ZNL5 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcdh11xF6ZNL5 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdh11xF6ZNL5 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcdh11xF6ZNL5 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh11xF6ZNL5 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh11xF6ZNL5 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.19■□□□□ 0.5
Pcdh11xF6ZNL5 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdh11xF6ZNL5 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcdh11xF6ZNL5 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh11xF6ZNL5 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh11xF6ZNL5 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh11xF6ZNL5 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh11xF6ZNL5 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh11xF6ZNL5 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh11xF6ZNL5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh11xF6ZNL5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh11xF6ZNL5 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh11xF6ZNL5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh11xF6ZNL5 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh11xF6ZNL5 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh11xF6ZNL5 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh11xF6ZNL5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh11xF6ZNL5 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh11xF6ZNL5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Pcdh11xF6ZNL5 Gm25016-201ENSMUST00000158399 131 ntBASIC18.18■□□□□ 0.5
Pcdh11xF6ZNL5 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Pcdh11xF6ZNL5 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Pcdh11xF6ZNL5 Gm6345-202ENSMUST00000180900 204 ntBASIC18.18■□□□□ 0.5
Pcdh11xF6ZNL5 Gm27389-201ENSMUST00000183622 195 ntBASIC18.18■□□□□ 0.5
Pcdh11xF6ZNL5 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.18■□□□□ 0.5
Pcdh11xF6ZNL5 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Pcdh11xF6ZNL5 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh11xF6ZNL5 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Gm7367-201ENSMUST00000057611 492 ntBASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh11xF6ZNL5 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh11xF6ZNL5 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh11xF6ZNL5 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh11xF6ZNL5 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh11xF6ZNL5 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh11xF6ZNL5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh11xF6ZNL5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pcdh11xF6ZNL5 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pcdh11xF6ZNL5 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh11xF6ZNL5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh11xF6ZNL5 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh11xF6ZNL5 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh11xF6ZNL5 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh11xF6ZNL5 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Pcdh11xF6ZNL5 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.16■□□□□ 0.5
Pcdh11xF6ZNL5 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh11xF6ZNL5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdh11xF6ZNL5 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdh11xF6ZNL5 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh11xF6ZNL5 Gm33142-201ENSMUST00000193913 867 ntBASIC18.16■□□□□ 0.5
Pcdh11xF6ZNL5 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh11xF6ZNL5 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh11xF6ZNL5 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms