Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc188F6WEU2 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.61■□□□□ 0.25
Ccdc188F6WEU2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc188F6WEU2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc188F6WEU2 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ccdc188F6WEU2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc188F6WEU2 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc188F6WEU2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc188F6WEU2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc188F6WEU2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ccdc188F6WEU2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc188F6WEU2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc188F6WEU2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc188F6WEU2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc188F6WEU2 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.6■□□□□ 0.25
Ccdc188F6WEU2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.6■□□□□ 0.25
Ccdc188F6WEU2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc188F6WEU2 Gm25406-201ENSMUST00000157599 105 ntBASIC16.6■□□□□ 0.25
Ccdc188F6WEU2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc188F6WEU2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc188F6WEU2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.6■□□□□ 0.25
Ccdc188F6WEU2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.6■□□□□ 0.25
Ccdc188F6WEU2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ccdc188F6WEU2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc188F6WEU2 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.6■□□□□ 0.25
Ccdc188F6WEU2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc188F6WEU2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc188F6WEU2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc188F6WEU2 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Gm37153-201ENSMUST00000193637 231 ntBASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Gm18187-201ENSMUST00000196476 984 ntBASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Gm7774-201ENSMUST00000200064 533 ntBASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc188F6WEU2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc188F6WEU2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.58■□□□□ 0.25
Ccdc188F6WEU2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Ccdc188F6WEU2 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.58■□□□□ 0.24
Ccdc188F6WEU2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc188F6WEU2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.58■□□□□ 0.24
Ccdc188F6WEU2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc188F6WEU2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.58■□□□□ 0.24
Ccdc188F6WEU2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ccdc188F6WEU2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.58■□□□□ 0.24
Ccdc188F6WEU2 Gm18622-201ENSMUST00000219361 595 ntBASIC16.58■□□□□ 0.24
Ccdc188F6WEU2 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.58■□□□□ 0.24
Ccdc188F6WEU2 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc188F6WEU2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Ccdc188F6WEU2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc188F6WEU2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Ccdc188F6WEU2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Ccdc188F6WEU2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc188F6WEU2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc188F6WEU2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc188F6WEU2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Ccdc188F6WEU2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Ccdc188F6WEU2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc188F6WEU2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc188F6WEU2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc188F6WEU2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc188F6WEU2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.57■□□□□ 0.24
Ccdc188F6WEU2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc188F6WEU2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ccdc188F6WEU2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.57■□□□□ 0.24
Ccdc188F6WEU2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc188F6WEU2 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.57■□□□□ 0.24
Ccdc188F6WEU2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.57■□□□□ 0.24
Ccdc188F6WEU2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.57■□□□□ 0.24
Ccdc188F6WEU2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc188F6WEU2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc188F6WEU2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc188F6WEU2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.57■□□□□ 0.24
Ccdc188F6WEU2 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.57■□□□□ 0.24
Ccdc188F6WEU2 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc188F6WEU2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc188F6WEU2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc188F6WEU2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc188F6WEU2 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms