Protein–RNA interactions for Protein: E9Q3L6

4930579F01Rik, RIKEN cDNA 4930579F01 gene, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4930579F01RikE9Q3L6 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
4930579F01RikE9Q3L6 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
4930579F01RikE9Q3L6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
4930579F01RikE9Q3L6 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
4930579F01RikE9Q3L6 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
4930579F01RikE9Q3L6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
4930579F01RikE9Q3L6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
4930579F01RikE9Q3L6 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 Rab3c-203ENSMUST00000224180 967 ntBASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
4930579F01RikE9Q3L6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.86□□□□□ -0.03
4930579F01RikE9Q3L6 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
4930579F01RikE9Q3L6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
4930579F01RikE9Q3L6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
4930579F01RikE9Q3L6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.86□□□□□ -0.03
4930579F01RikE9Q3L6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
4930579F01RikE9Q3L6 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
4930579F01RikE9Q3L6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
4930579F01RikE9Q3L6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
4930579F01RikE9Q3L6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
4930579F01RikE9Q3L6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms