Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC9.22□□□□□ -0.93
Herc1E9PZP8 Gm12859-201ENSMUST00000117834 427 ntBASIC9.22□□□□□ -0.93
Herc1E9PZP8 Gm12957-201ENSMUST00000117835 377 ntBASIC9.22□□□□□ -0.93
Herc1E9PZP8 Ighv5-13-201ENSMUST00000193550 290 ntBASIC9.22□□□□□ -0.93
Herc1E9PZP8 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Herc1E9PZP8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Herc1E9PZP8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Herc1E9PZP8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Herc1E9PZP8 Best4-ps-201ENSMUST00000129783 1380 ntBASIC9.22□□□□□ -0.93
Herc1E9PZP8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Herc1E9PZP8 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Herc1E9PZP8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Herc1E9PZP8 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
Herc1E9PZP8 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC9.21□□□□□ -0.93
Herc1E9PZP8 Gm8515-201ENSMUST00000194852 576 ntBASIC9.21□□□□□ -0.93
Herc1E9PZP8 Gm45668-201ENSMUST00000211271 493 ntBASIC9.21□□□□□ -0.93
Herc1E9PZP8 Gm9063-201ENSMUST00000223299 582 ntBASIC9.21□□□□□ -0.93
Herc1E9PZP8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Herc1E9PZP8 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Herc1E9PZP8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.93
Herc1E9PZP8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Herc1E9PZP8 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC9.21□□□□□ -0.93
Herc1E9PZP8 Gm6888-201ENSMUST00000221983 706 ntBASIC9.21□□□□□ -0.93
Herc1E9PZP8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Herc1E9PZP8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Herc1E9PZP8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC9.21□□□□□ -0.94
Herc1E9PZP8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Herc1E9PZP8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Herc1E9PZP8 Gm45784-201ENSMUST00000188360 142 ntBASIC9.21□□□□□ -0.94
Herc1E9PZP8 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC9.21□□□□□ -0.94
Herc1E9PZP8 Gpr146-202ENSMUST00000053120 1040 ntBASIC9.21□□□□□ -0.94
Herc1E9PZP8 Gm19721-201ENSMUST00000195284 1764 ntBASIC9.21□□□□□ -0.94
Herc1E9PZP8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Herc1E9PZP8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Herc1E9PZP8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Herc1E9PZP8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Herc1E9PZP8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Herc1E9PZP8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC9.21□□□□□ -0.94
Herc1E9PZP8 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Herc1E9PZP8 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Herc1E9PZP8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Herc1E9PZP8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Herc1E9PZP8 Gm15442-201ENSMUST00000117905 1527 ntBASIC9.21□□□□□ -0.94
Herc1E9PZP8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Herc1E9PZP8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Gm3695-201ENSMUST00000087222 1009 ntBASIC9.2□□□□□ -0.94
Herc1E9PZP8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Gm13392-201ENSMUST00000117708 150 ntBASIC9.2□□□□□ -0.94
Herc1E9PZP8 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC9.2□□□□□ -0.94
Herc1E9PZP8 Gm18934-201ENSMUST00000216671 1044 ntBASIC9.2□□□□□ -0.94
Herc1E9PZP8 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Gm9200-201ENSMUST00000118513 1354 ntBASIC9.2□□□□□ -0.94
Herc1E9PZP8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC9.2□□□□□ -0.94
Herc1E9PZP8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Gm37714-201ENSMUST00000194742 342 ntBASIC9.19□□□□□ -0.94
Herc1E9PZP8 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 AC124751.1-201ENSMUST00000222716 1408 ntBASIC9.19□□□□□ -0.94
Herc1E9PZP8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Herc1E9PZP8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms