Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn1aA2APX8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn1aA2APX8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn1aA2APX8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.21■□□□□ 0.35
Scn1aA2APX8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scn1aA2APX8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn1aA2APX8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn1aA2APX8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Scn1aA2APX8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Scn1aA2APX8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn1aA2APX8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Scn1aA2APX8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.21■□□□□ 0.35
Scn1aA2APX8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn1aA2APX8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.21■□□□□ 0.35
Scn1aA2APX8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scn1aA2APX8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.21■□□□□ 0.35
Scn1aA2APX8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn1aA2APX8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.21■□□□□ 0.35
Scn1aA2APX8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Scn1aA2APX8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Scn1aA2APX8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Scn1aA2APX8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Scn1aA2APX8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn1aA2APX8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn1aA2APX8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scn1aA2APX8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Scn1aA2APX8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn1aA2APX8 Gm15165-201ENSMUST00000118140 502 ntBASIC17.2■□□□□ 0.34
Scn1aA2APX8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.2■□□□□ 0.34
Scn1aA2APX8 Gm7506-201ENSMUST00000207758 815 ntBASIC17.2■□□□□ 0.34
Scn1aA2APX8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.2■□□□□ 0.34
Scn1aA2APX8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn1aA2APX8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn1aA2APX8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn1aA2APX8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Scn1aA2APX8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn1aA2APX8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Scn1aA2APX8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn1aA2APX8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn1aA2APX8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn1aA2APX8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn1aA2APX8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Scn1aA2APX8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn1aA2APX8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.2■□□□□ 0.34
Scn1aA2APX8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn1aA2APX8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Scn1aA2APX8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn1aA2APX8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Scn1aA2APX8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.2■□□□□ 0.34
Scn1aA2APX8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Scn1aA2APX8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scn1aA2APX8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn1aA2APX8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn1aA2APX8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn1aA2APX8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn1aA2APX8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn1aA2APX8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn1aA2APX8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn1aA2APX8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scn1aA2APX8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.19■□□□□ 0.34
Scn1aA2APX8 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Scn1aA2APX8 Gm25745-201ENSMUST00000174945 133 ntBASIC17.19■□□□□ 0.34
Scn1aA2APX8 Gm43347-201ENSMUST00000200226 580 ntBASIC17.19■□□□□ 0.34
Scn1aA2APX8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn1aA2APX8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn1aA2APX8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scn1aA2APX8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scn1aA2APX8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn1aA2APX8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn1aA2APX8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn1aA2APX8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Scn1aA2APX8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scn1aA2APX8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn1aA2APX8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn1aA2APX8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scn1aA2APX8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn1aA2APX8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn1aA2APX8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn1aA2APX8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn1aA2APX8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn1aA2APX8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Scn1aA2APX8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Scn1aA2APX8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn1aA2APX8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.18■□□□□ 0.34
Scn1aA2APX8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.18■□□□□ 0.34
Scn1aA2APX8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Scn1aA2APX8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn1aA2APX8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn1aA2APX8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn1aA2APX8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Scn1aA2APX8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn1aA2APX8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn1aA2APX8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn1aA2APX8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn1aA2APX8 Gm13312-201ENSMUST00000119631 718 ntBASIC17.17■□□□□ 0.34
Scn1aA2APX8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.17■□□□□ 0.34
Scn1aA2APX8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Scn1aA2APX8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Scn1aA2APX8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.17■□□□□ 0.34
Scn1aA2APX8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms