Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Shroom2A2ALU4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Shroom2A2ALU4 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC25.91■■□□□ 1.74
Shroom2A2ALU4 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Shroom2A2ALU4 AC147366.1-201ENSMUST00000227671 852 ntBASIC25.91■■□□□ 1.74
Shroom2A2ALU4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Shroom2A2ALU4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Shroom2A2ALU4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Shroom2A2ALU4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Shroom2A2ALU4 Gfra2-202ENSMUST00000227633 1480 ntBASIC25.9■■□□□ 1.74
Shroom2A2ALU4 Gm7488-201ENSMUST00000117148 684 ntBASIC25.9■■□□□ 1.74
Shroom2A2ALU4 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC25.9■■□□□ 1.74
Shroom2A2ALU4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC25.9■■□□□ 1.74
Shroom2A2ALU4 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Shroom2A2ALU4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC25.9■■□□□ 1.74
Shroom2A2ALU4 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Shroom2A2ALU4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Shroom2A2ALU4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Shroom2A2ALU4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Shroom2A2ALU4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC25.89■■□□□ 1.74
Shroom2A2ALU4 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
Shroom2A2ALU4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC25.89■■□□□ 1.73
Shroom2A2ALU4 Mir1938-201ENSMUST00000158746 100 ntBASIC25.89■■□□□ 1.73
Shroom2A2ALU4 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC25.89■■□□□ 1.73
Shroom2A2ALU4 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC25.89■■□□□ 1.73
Shroom2A2ALU4 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Shroom2A2ALU4 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Shroom2A2ALU4 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
Shroom2A2ALU4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC25.89■■□□□ 1.73
Shroom2A2ALU4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Shroom2A2ALU4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Shroom2A2ALU4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Shroom2A2ALU4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC25.88■■□□□ 1.73
Shroom2A2ALU4 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Shroom2A2ALU4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Shroom2A2ALU4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Shroom2A2ALU4 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Shroom2A2ALU4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Shroom2A2ALU4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Shroom2A2ALU4 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
Shroom2A2ALU4 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
Shroom2A2ALU4 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC25.88■■□□□ 1.73
Shroom2A2ALU4 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Shroom2A2ALU4 Gm20553-201ENSMUST00000204205 844 ntBASIC25.88■■□□□ 1.73
Shroom2A2ALU4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Shroom2A2ALU4 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
Shroom2A2ALU4 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC25.88■■□□□ 1.73
Shroom2A2ALU4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Shroom2A2ALU4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Shroom2A2ALU4 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC25.87■■□□□ 1.73
Shroom2A2ALU4 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Shroom2A2ALU4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC25.87■■□□□ 1.73
Shroom2A2ALU4 Mir7684-201ENSMUST00000183858 60 ntBASIC25.87■■□□□ 1.73
Shroom2A2ALU4 Mir7085-201ENSMUST00000184353 66 ntBASIC25.87■■□□□ 1.73
Shroom2A2ALU4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Shroom2A2ALU4 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Shroom2A2ALU4 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Shroom2A2ALU4 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
Shroom2A2ALU4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Shroom2A2ALU4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC25.87■■□□□ 1.73
Shroom2A2ALU4 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Shroom2A2ALU4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Shroom2A2ALU4 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Shroom2A2ALU4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
Shroom2A2ALU4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Shroom2A2ALU4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Shroom2A2ALU4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
Shroom2A2ALU4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Shroom2A2ALU4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC25.86■■□□□ 1.73
Shroom2A2ALU4 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Shroom2A2ALU4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Shroom2A2ALU4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Shroom2A2ALU4 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Shroom2A2ALU4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Shroom2A2ALU4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
Shroom2A2ALU4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Shroom2A2ALU4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Shroom2A2ALU4 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Shroom2A2ALU4 Gm44719-201ENSMUST00000206404 149 ntBASIC25.85■■□□□ 1.73
Shroom2A2ALU4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
Shroom2A2ALU4 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Shroom2A2ALU4 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC25.85■■□□□ 1.73
Shroom2A2ALU4 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Shroom2A2ALU4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Shroom2A2ALU4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
Shroom2A2ALU4 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Shroom2A2ALU4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Shroom2A2ALU4 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Shroom2A2ALU4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Shroom2A2ALU4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Shroom2A2ALU4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Shroom2A2ALU4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Shroom2A2ALU4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Shroom2A2ALU4 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Shroom2A2ALU4 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC25.85■■□□□ 1.73
Shroom2A2ALU4 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Shroom2A2ALU4 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC25.85■■□□□ 1.73
Shroom2A2ALU4 Mir7036b-201ENSMUST00000184791 63 ntBASIC25.85■■□□□ 1.73
Shroom2A2ALU4 Mir6420-201ENSMUST00000185032 102 ntBASIC25.85■■□□□ 1.73
Shroom2A2ALU4 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms