Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc112A0AUP1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc112A0AUP1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc112A0AUP1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc112A0AUP1 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc112A0AUP1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.81■□□□□ 0.6
Ccdc112A0AUP1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.81■□□□□ 0.6
Ccdc112A0AUP1 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.81■□□□□ 0.6
Ccdc112A0AUP1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.81■□□□□ 0.6
Ccdc112A0AUP1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc112A0AUP1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc112A0AUP1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc112A0AUP1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc112A0AUP1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc112A0AUP1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc112A0AUP1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.81■□□□□ 0.6
Ccdc112A0AUP1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc112A0AUP1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc112A0AUP1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc112A0AUP1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc112A0AUP1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc112A0AUP1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc112A0AUP1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc112A0AUP1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc112A0AUP1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc112A0AUP1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc112A0AUP1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.8■□□□□ 0.6
Ccdc112A0AUP1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc112A0AUP1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.8■□□□□ 0.6
Ccdc112A0AUP1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc112A0AUP1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.8■□□□□ 0.6
Ccdc112A0AUP1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc112A0AUP1 Gm27463-201ENSMUST00000183569 57 ntBASIC18.8■□□□□ 0.6
Ccdc112A0AUP1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc112A0AUP1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc112A0AUP1 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc112A0AUP1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc112A0AUP1 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc112A0AUP1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc112A0AUP1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc112A0AUP1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc112A0AUP1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc112A0AUP1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc112A0AUP1 Phf7-203ENSMUST00000226565 1971 ntBASIC18.79■□□□□ 0.6
Ccdc112A0AUP1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.79■□□□□ 0.6
Ccdc112A0AUP1 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc112A0AUP1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc112A0AUP1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc112A0AUP1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc112A0AUP1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc112A0AUP1 Mir5122-201ENSMUST00000175004 89 ntBASIC18.79■□□□□ 0.6
Ccdc112A0AUP1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.79■□□□□ 0.6
Ccdc112A0AUP1 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.79■□□□□ 0.6
Ccdc112A0AUP1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc112A0AUP1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc112A0AUP1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Ccdc112A0AUP1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc112A0AUP1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc112A0AUP1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Ccdc112A0AUP1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc112A0AUP1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc112A0AUP1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Ccdc112A0AUP1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc112A0AUP1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.77■□□□□ 0.6
Ccdc112A0AUP1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc112A0AUP1 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.77■□□□□ 0.6
Ccdc112A0AUP1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc112A0AUP1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc112A0AUP1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc112A0AUP1 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc112A0AUP1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc112A0AUP1 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc112A0AUP1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc112A0AUP1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc112A0AUP1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc112A0AUP1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc112A0AUP1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms