Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv29A0A0G2LB96 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trbv29A0A0G2LB96 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv29A0A0G2LB96 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv29A0A0G2LB96 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv29A0A0G2LB96 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.65□□□□□ -0.22
Trbv29A0A0G2LB96 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv29A0A0G2LB96 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trbv29A0A0G2LB96 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms