Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Gm27275-201ENSMUST00000184318 272 ntBASIC15.65■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Gm43183-201ENSMUST00000200632 547 ntBASIC15.65■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sirpb1aA0A0A6YYP6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.65■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sirpb1aA0A0A6YYP6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.64■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Gm22240-201ENSMUST00000175225 82 ntBASIC15.64■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Gm18666-201ENSMUST00000190039 958 ntBASIC15.64■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.64■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Gm9731-201ENSMUST00000209480 747 ntBASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.63■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.61■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms