Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Rubie-203ENSMUST00000227803 2430 ntBASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Gm38205-201ENSMUST00000192243 258 ntBASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-4A0A075B654 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Gm10418-201ENSMUST00000100943 576 ntBASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Smad6-203ENSMUST00000179458 273 ntBASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-4A0A075B654 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Gm43272-201ENSMUST00000200599 1584 ntBASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Gm43352-201ENSMUST00000196419 3065 ntBASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav3-4A0A075B654 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms