Protein–RNA interactions for Protein: Q9Z1P4

Lgr5, Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5Q9Z1P4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lgr5Q9Z1P4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lgr5Q9Z1P4 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.7■□□□□ 0.74
Lgr5Q9Z1P4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lgr5Q9Z1P4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lgr5Q9Z1P4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lgr5Q9Z1P4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lgr5Q9Z1P4 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Lgr5Q9Z1P4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Lgr5Q9Z1P4 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lgr5Q9Z1P4 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.69■□□□□ 0.74
Lgr5Q9Z1P4 Gm25406-201ENSMUST00000157599 105 ntBASIC19.69■□□□□ 0.74
Lgr5Q9Z1P4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.69■□□□□ 0.74
Lgr5Q9Z1P4 Gm6550-201ENSMUST00000187574 993 ntBASIC19.69■□□□□ 0.74
Lgr5Q9Z1P4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lgr5Q9Z1P4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lgr5Q9Z1P4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lgr5Q9Z1P4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lgr5Q9Z1P4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lgr5Q9Z1P4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lgr5Q9Z1P4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lgr5Q9Z1P4 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lgr5Q9Z1P4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.68■□□□□ 0.74
Lgr5Q9Z1P4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lgr5Q9Z1P4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.68■□□□□ 0.74
Lgr5Q9Z1P4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lgr5Q9Z1P4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.68■□□□□ 0.74
Lgr5Q9Z1P4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
Lgr5Q9Z1P4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.68■□□□□ 0.74
Lgr5Q9Z1P4 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.68■□□□□ 0.74
Lgr5Q9Z1P4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lgr5Q9Z1P4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Lgr5Q9Z1P4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Lgr5Q9Z1P4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lgr5Q9Z1P4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Lgr5Q9Z1P4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Lgr5Q9Z1P4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lgr5Q9Z1P4 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lgr5Q9Z1P4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lgr5Q9Z1P4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lgr5Q9Z1P4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lgr5Q9Z1P4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lgr5Q9Z1P4 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lgr5Q9Z1P4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Lgr5Q9Z1P4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Lgr5Q9Z1P4 Gm13036-201ENSMUST00000117799 748 ntBASIC19.67■□□□□ 0.74
Lgr5Q9Z1P4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lgr5Q9Z1P4 AV026068-213ENSMUST00000223675 1171 ntBASIC19.67■□□□□ 0.74
Lgr5Q9Z1P4 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lgr5Q9Z1P4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lgr5Q9Z1P4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Lgr5Q9Z1P4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Lgr5Q9Z1P4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lgr5Q9Z1P4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lgr5Q9Z1P4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lgr5Q9Z1P4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Lgr5Q9Z1P4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lgr5Q9Z1P4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lgr5Q9Z1P4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lgr5Q9Z1P4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lgr5Q9Z1P4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lgr5Q9Z1P4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lgr5Q9Z1P4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lgr5Q9Z1P4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Gm8655-201ENSMUST00000221159 852 ntBASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lgr5Q9Z1P4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lgr5Q9Z1P4 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.65■□□□□ 0.74
Lgr5Q9Z1P4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lgr5Q9Z1P4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lgr5Q9Z1P4 Gm15467-201ENSMUST00000120582 445 ntBASIC19.65■□□□□ 0.74
Lgr5Q9Z1P4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lgr5Q9Z1P4 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lgr5Q9Z1P4 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Lgr5Q9Z1P4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lgr5Q9Z1P4 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms