Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Hmg20bQ9Z104 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hmg20bQ9Z104 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.47■□□□□ 0.71
Hmg20bQ9Z104 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Hmg20bQ9Z104 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hmg20bQ9Z104 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Hmg20bQ9Z104 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.47■□□□□ 0.71
Hmg20bQ9Z104 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hmg20bQ9Z104 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hmg20bQ9Z104 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hmg20bQ9Z104 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Hmg20bQ9Z104 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Hmg20bQ9Z104 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hmg20bQ9Z104 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmg20bQ9Z104 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmg20bQ9Z104 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hmg20bQ9Z104 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmg20bQ9Z104 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmg20bQ9Z104 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hmg20bQ9Z104 Gm10013-201ENSMUST00000106074 672 ntBASIC19.46■□□□□ 0.71
Hmg20bQ9Z104 Gm11355-201ENSMUST00000121120 306 ntBASIC19.46■□□□□ 0.71
Hmg20bQ9Z104 Gm10231-201ENSMUST00000181584 441 ntBASIC19.46■□□□□ 0.71
Hmg20bQ9Z104 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmg20bQ9Z104 Gm10175-202ENSMUST00000208752 441 ntBASIC19.46■□□□□ 0.71
Hmg20bQ9Z104 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmg20bQ9Z104 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmg20bQ9Z104 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hmg20bQ9Z104 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmg20bQ9Z104 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hmg20bQ9Z104 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmg20bQ9Z104 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmg20bQ9Z104 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmg20bQ9Z104 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
Hmg20bQ9Z104 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmg20bQ9Z104 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmg20bQ9Z104 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmg20bQ9Z104 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmg20bQ9Z104 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hmg20bQ9Z104 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmg20bQ9Z104 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.45■□□□□ 0.7
Hmg20bQ9Z104 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hmg20bQ9Z104 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.45■□□□□ 0.7
Hmg20bQ9Z104 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.45■□□□□ 0.7
Hmg20bQ9Z104 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.45■□□□□ 0.7
Hmg20bQ9Z104 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.45■□□□□ 0.7
Hmg20bQ9Z104 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.45■□□□□ 0.7
Hmg20bQ9Z104 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmg20bQ9Z104 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmg20bQ9Z104 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hmg20bQ9Z104 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.45■□□□□ 0.7
Hmg20bQ9Z104 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Gm36967-201ENSMUST00000193814 266 ntBASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hmg20bQ9Z104 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20bQ9Z104 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms