Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx9Q9WUH2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.67■□□□□ 0.1
Lhx9Q9WUH2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx9Q9WUH2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx9Q9WUH2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx9Q9WUH2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Lhx9Q9WUH2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.67■□□□□ 0.1
Lhx9Q9WUH2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.67■□□□□ 0.1
Lhx9Q9WUH2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx9Q9WUH2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx9Q9WUH2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx9Q9WUH2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.67■□□□□ 0.1
Lhx9Q9WUH2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx9Q9WUH2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx9Q9WUH2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx9Q9WUH2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx9Q9WUH2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx9Q9WUH2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx9Q9WUH2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx9Q9WUH2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx9Q9WUH2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx9Q9WUH2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Lhx9Q9WUH2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Gm18421-201ENSMUST00000204122 625 ntBASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx9Q9WUH2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx9Q9WUH2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx9Q9WUH2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.65■□□□□ 0.1
Lhx9Q9WUH2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx9Q9WUH2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx9Q9WUH2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx9Q9WUH2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx9Q9WUH2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Lhx9Q9WUH2 Gm24589-201ENSMUST00000116692 94 ntBASIC15.65■□□□□ 0.1
Lhx9Q9WUH2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx9Q9WUH2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx9Q9WUH2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.65■□□□□ 0.1
Lhx9Q9WUH2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.65■□□□□ 0.1
Lhx9Q9WUH2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx9Q9WUH2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx9Q9WUH2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx9Q9WUH2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx9Q9WUH2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx9Q9WUH2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx9Q9WUH2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx9Q9WUH2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
Lhx9Q9WUH2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
Lhx9Q9WUH2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.64■□□□□ 0.1
Lhx9Q9WUH2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Lhx9Q9WUH2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.1
Lhx9Q9WUH2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx9Q9WUH2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx9Q9WUH2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Lhx9Q9WUH2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx9Q9WUH2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx9Q9WUH2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx9Q9WUH2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx9Q9WUH2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Lhx9Q9WUH2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx9Q9WUH2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx9Q9WUH2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx9Q9WUH2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.64■□□□□ 0.09
Lhx9Q9WUH2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx9Q9WUH2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx9Q9WUH2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx9Q9WUH2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Lhx9Q9WUH2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx9Q9WUH2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.64■□□□□ 0.09
Lhx9Q9WUH2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms