Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.55■□□□□ 0.24
Scn8aQ9WTU3 Mir6404-201ENSMUST00000183699 94 ntBASIC16.55■□□□□ 0.24
Scn8aQ9WTU3 Gm7506-201ENSMUST00000207758 815 ntBASIC16.55■□□□□ 0.24
Scn8aQ9WTU3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn8aQ9WTU3 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.55■□□□□ 0.24
Scn8aQ9WTU3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn8aQ9WTU3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn8aQ9WTU3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn8aQ9WTU3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn8aQ9WTU3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn8aQ9WTU3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn8aQ9WTU3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Scn8aQ9WTU3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn8aQ9WTU3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn8aQ9WTU3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn8aQ9WTU3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn8aQ9WTU3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn8aQ9WTU3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn8aQ9WTU3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Scn8aQ9WTU3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Scn8aQ9WTU3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Scn8aQ9WTU3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn8aQ9WTU3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn8aQ9WTU3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn8aQ9WTU3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn8aQ9WTU3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Scn8aQ9WTU3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.54■□□□□ 0.24
Scn8aQ9WTU3 Gm13312-201ENSMUST00000119631 718 ntBASIC16.54■□□□□ 0.24
Scn8aQ9WTU3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.54■□□□□ 0.24
Scn8aQ9WTU3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn8aQ9WTU3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn8aQ9WTU3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn8aQ9WTU3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scn8aQ9WTU3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn8aQ9WTU3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scn8aQ9WTU3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Scn8aQ9WTU3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scn8aQ9WTU3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scn8aQ9WTU3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.53■□□□□ 0.24
Scn8aQ9WTU3 Gm12497-201ENSMUST00000138778 237 ntBASIC16.53■□□□□ 0.24
Scn8aQ9WTU3 Gm25745-201ENSMUST00000174945 133 ntBASIC16.53■□□□□ 0.24
Scn8aQ9WTU3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.53■□□□□ 0.24
Scn8aQ9WTU3 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.53■□□□□ 0.24
Scn8aQ9WTU3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Scn8aQ9WTU3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn8aQ9WTU3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn8aQ9WTU3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn8aQ9WTU3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn8aQ9WTU3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn8aQ9WTU3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn8aQ9WTU3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn8aQ9WTU3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn8aQ9WTU3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.53■□□□□ 0.24
Scn8aQ9WTU3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn8aQ9WTU3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Scn8aQ9WTU3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn8aQ9WTU3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn8aQ9WTU3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Scn8aQ9WTU3 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn8aQ9WTU3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn8aQ9WTU3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn8aQ9WTU3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Scn8aQ9WTU3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Scn8aQ9WTU3 Gm43347-201ENSMUST00000200226 580 ntBASIC16.52■□□□□ 0.24
Scn8aQ9WTU3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.52■□□□□ 0.24
Scn8aQ9WTU3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn8aQ9WTU3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Scn8aQ9WTU3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn8aQ9WTU3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn8aQ9WTU3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn8aQ9WTU3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Scn8aQ9WTU3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn8aQ9WTU3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn8aQ9WTU3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn8aQ9WTU3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn8aQ9WTU3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn8aQ9WTU3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn8aQ9WTU3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Scn8aQ9WTU3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn8aQ9WTU3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn8aQ9WTU3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn8aQ9WTU3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn8aQ9WTU3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn8aQ9WTU3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.51■□□□□ 0.23
Scn8aQ9WTU3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scn8aQ9WTU3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn8aQ9WTU3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.51■□□□□ 0.23
Scn8aQ9WTU3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Scn8aQ9WTU3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scn8aQ9WTU3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.51■□□□□ 0.23
Scn8aQ9WTU3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn8aQ9WTU3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Scn8aQ9WTU3 Haglr-201ENSMUST00000100000 2085 ntBASIC16.51■□□□□ 0.23
Scn8aQ9WTU3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scn8aQ9WTU3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Scn8aQ9WTU3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn8aQ9WTU3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn8aQ9WTU3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.5■□□□□ 0.23
Scn8aQ9WTU3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.5■□□□□ 0.23
Scn8aQ9WTU3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms