Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh5Q9QUM7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Msh5Q9QUM7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh5Q9QUM7 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Msh5Q9QUM7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.87■□□□□ 0.29
Msh5Q9QUM7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.87■□□□□ 0.29
Msh5Q9QUM7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh5Q9QUM7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Msh5Q9QUM7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh5Q9QUM7 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh5Q9QUM7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.87■□□□□ 0.29
Msh5Q9QUM7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh5Q9QUM7 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Msh5Q9QUM7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh5Q9QUM7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh5Q9QUM7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh5Q9QUM7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.87■□□□□ 0.29
Msh5Q9QUM7 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh5Q9QUM7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Msh5Q9QUM7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Msh5Q9QUM7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh5Q9QUM7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Msh5Q9QUM7 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Msh5Q9QUM7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Msh5Q9QUM7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh5Q9QUM7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh5Q9QUM7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh5Q9QUM7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Msh5Q9QUM7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh5Q9QUM7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.86■□□□□ 0.29
Msh5Q9QUM7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh5Q9QUM7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Msh5Q9QUM7 Gm5244-202ENSMUST00000189517 743 ntBASIC16.86■□□□□ 0.29
Msh5Q9QUM7 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.86■□□□□ 0.29
Msh5Q9QUM7 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC16.86■□□□□ 0.29
Msh5Q9QUM7 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Msh5Q9QUM7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh5Q9QUM7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh5Q9QUM7 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh5Q9QUM7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Msh5Q9QUM7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh5Q9QUM7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Msh5Q9QUM7 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Msh5Q9QUM7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh5Q9QUM7 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh5Q9QUM7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh5Q9QUM7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh5Q9QUM7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh5Q9QUM7 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Msh5Q9QUM7 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Msh5Q9QUM7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Msh5Q9QUM7 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.85■□□□□ 0.29
Msh5Q9QUM7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.85■□□□□ 0.29
Msh5Q9QUM7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.85■□□□□ 0.29
Msh5Q9QUM7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh5Q9QUM7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Msh5Q9QUM7 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
Msh5Q9QUM7 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh5Q9QUM7 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh5Q9QUM7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh5Q9QUM7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh5Q9QUM7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh5Q9QUM7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Msh5Q9QUM7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Msh5Q9QUM7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Gm20614-201ENSMUST00000177106 632 ntBASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Mir6982-201ENSMUST00000184354 68 ntBASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh5Q9QUM7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms