Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.43■□□□□ 0.38
Nup50Q9JIH2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nup50Q9JIH2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nup50Q9JIH2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nup50Q9JIH2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup50Q9JIH2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nup50Q9JIH2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nup50Q9JIH2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup50Q9JIH2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup50Q9JIH2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup50Q9JIH2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup50Q9JIH2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup50Q9JIH2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Nup50Q9JIH2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup50Q9JIH2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nup50Q9JIH2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup50Q9JIH2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Nup50Q9JIH2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nup50Q9JIH2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
Nup50Q9JIH2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup50Q9JIH2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup50Q9JIH2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Nup50Q9JIH2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup50Q9JIH2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup50Q9JIH2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup50Q9JIH2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup50Q9JIH2 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.42■□□□□ 0.38
Nup50Q9JIH2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nup50Q9JIH2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nup50Q9JIH2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nup50Q9JIH2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup50Q9JIH2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Nup50Q9JIH2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Nup50Q9JIH2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup50Q9JIH2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup50Q9JIH2 Gm16061-201ENSMUST00000122167 857 ntBASIC17.41■□□□□ 0.38
Nup50Q9JIH2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nup50Q9JIH2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.41■□□□□ 0.38
Nup50Q9JIH2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.41■□□□□ 0.38
Nup50Q9JIH2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nup50Q9JIH2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.41■□□□□ 0.38
Nup50Q9JIH2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup50Q9JIH2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup50Q9JIH2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nup50Q9JIH2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nup50Q9JIH2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup50Q9JIH2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup50Q9JIH2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup50Q9JIH2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.41■□□□□ 0.38
Nup50Q9JIH2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Nup50Q9JIH2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup50Q9JIH2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Nup50Q9JIH2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nup50Q9JIH2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nup50Q9JIH2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Gm13436-201ENSMUST00000120418 567 ntBASIC17.39■□□□□ 0.37
Nup50Q9JIH2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Gm37055-201ENSMUST00000191866 133 ntBASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Gm18421-201ENSMUST00000204122 625 ntBASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Gm30025-201ENSMUST00000218555 728 ntBASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Gm10566-201ENSMUST00000086739 996 ntBASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms