Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ube3bQ9ES34 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ube3bQ9ES34 Gm27741-201ENSMUST00000185060 237 ntBASIC19.57■□□□□ 0.72
Ube3bQ9ES34 Birc2-201ENSMUST00000054878 378 ntBASIC19.57■□□□□ 0.72
Ube3bQ9ES34 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ube3bQ9ES34 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.57■□□□□ 0.72
Ube3bQ9ES34 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ube3bQ9ES34 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ube3bQ9ES34 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ube3bQ9ES34 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ube3bQ9ES34 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Ube3bQ9ES34 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ube3bQ9ES34 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ube3bQ9ES34 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ube3bQ9ES34 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.56■□□□□ 0.72
Ube3bQ9ES34 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ube3bQ9ES34 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube3bQ9ES34 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.56■□□□□ 0.72
Ube3bQ9ES34 Gm7153-201ENSMUST00000117092 455 ntBASIC19.56■□□□□ 0.72
Ube3bQ9ES34 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.56■□□□□ 0.72
Ube3bQ9ES34 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.56■□□□□ 0.72
Ube3bQ9ES34 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
Ube3bQ9ES34 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.56■□□□□ 0.72
Ube3bQ9ES34 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube3bQ9ES34 Gm44454-201ENSMUST00000198541 138 ntBASIC19.56■□□□□ 0.72
Ube3bQ9ES34 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.56■□□□□ 0.72
Ube3bQ9ES34 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.56■□□□□ 0.72
Ube3bQ9ES34 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube3bQ9ES34 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ube3bQ9ES34 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube3bQ9ES34 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ube3bQ9ES34 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube3bQ9ES34 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube3bQ9ES34 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ube3bQ9ES34 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube3bQ9ES34 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ube3bQ9ES34 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.55■□□□□ 0.72
Ube3bQ9ES34 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube3bQ9ES34 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ube3bQ9ES34 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ube3bQ9ES34 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ube3bQ9ES34 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube3bQ9ES34 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ube3bQ9ES34 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.55■□□□□ 0.72
Ube3bQ9ES34 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.55■□□□□ 0.72
Ube3bQ9ES34 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube3bQ9ES34 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ube3bQ9ES34 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube3bQ9ES34 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.55■□□□□ 0.72
Ube3bQ9ES34 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.55■□□□□ 0.72
Ube3bQ9ES34 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube3bQ9ES34 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3bQ9ES34 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube3bQ9ES34 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube3bQ9ES34 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ube3bQ9ES34 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ube3bQ9ES34 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ube3bQ9ES34 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube3bQ9ES34 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube3bQ9ES34 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube3bQ9ES34 Gm24589-201ENSMUST00000116692 94 ntBASIC19.53■□□□□ 0.72
Ube3bQ9ES34 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ube3bQ9ES34 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.53■□□□□ 0.72
Ube3bQ9ES34 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube3bQ9ES34 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.53■□□□□ 0.72
Ube3bQ9ES34 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube3bQ9ES34 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ube3bQ9ES34 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.53■□□□□ 0.72
Ube3bQ9ES34 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube3bQ9ES34 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ube3bQ9ES34 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube3bQ9ES34 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube3bQ9ES34 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube3bQ9ES34 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms