Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubb3Q9ERD7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.4■□□□□ 0.22
Tubb3Q9ERD7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubb3Q9ERD7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tubb3Q9ERD7 Gm9731-201ENSMUST00000209480 747 ntBASIC16.4■□□□□ 0.22
Tubb3Q9ERD7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.4■□□□□ 0.22
Tubb3Q9ERD7 Gm18101-201ENSMUST00000215769 548 ntBASIC16.4■□□□□ 0.22
Tubb3Q9ERD7 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.4■□□□□ 0.22
Tubb3Q9ERD7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubb3Q9ERD7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubb3Q9ERD7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.4■□□□□ 0.22
Tubb3Q9ERD7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubb3Q9ERD7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubb3Q9ERD7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubb3Q9ERD7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tubb3Q9ERD7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
Tubb3Q9ERD7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tubb3Q9ERD7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Gm23634-201ENSMUST00000175071 91 ntBASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.38■□□□□ 0.21
Tubb3Q9ERD7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Gm13474-201ENSMUST00000122466 815 ntBASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Gm22697-201ENSMUST00000175194 63 ntBASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tubb3Q9ERD7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms