Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a3bpQ9EQG9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Col4a3bpQ9EQG9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Col4a3bpQ9EQG9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Col4a3bpQ9EQG9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a3bpQ9EQG9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a3bpQ9EQG9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a3bpQ9EQG9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a3bpQ9EQG9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a3bpQ9EQG9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Col4a3bpQ9EQG9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a3bpQ9EQG9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a3bpQ9EQG9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a3bpQ9EQG9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a3bpQ9EQG9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a3bpQ9EQG9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Col4a3bpQ9EQG9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a3bpQ9EQG9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a3bpQ9EQG9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a3bpQ9EQG9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Col4a3bpQ9EQG9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.91■□□□□ 0.62
Col4a3bpQ9EQG9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a3bpQ9EQG9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a3bpQ9EQG9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a3bpQ9EQG9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a3bpQ9EQG9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Col4a3bpQ9EQG9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a3bpQ9EQG9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a3bpQ9EQG9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Col4a3bpQ9EQG9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a3bpQ9EQG9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a3bpQ9EQG9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a3bpQ9EQG9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.9■□□□□ 0.62
Col4a3bpQ9EQG9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Col4a3bpQ9EQG9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Col4a3bpQ9EQG9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a3bpQ9EQG9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a3bpQ9EQG9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Col4a3bpQ9EQG9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a3bpQ9EQG9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Col4a3bpQ9EQG9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a3bpQ9EQG9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Col4a3bpQ9EQG9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a3bpQ9EQG9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Col4a3bpQ9EQG9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Col4a3bpQ9EQG9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Col4a3bpQ9EQG9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Col4a3bpQ9EQG9 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.89■□□□□ 0.61
Col4a3bpQ9EQG9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a3bpQ9EQG9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a3bpQ9EQG9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a3bpQ9EQG9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a3bpQ9EQG9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a3bpQ9EQG9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a3bpQ9EQG9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a3bpQ9EQG9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a3bpQ9EQG9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 Gm13186-201ENSMUST00000118031 316 ntBASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 Gm16061-201ENSMUST00000122167 857 ntBASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms