Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm27703-201ENSMUST00000184836 110 ntBASIC18.73■□□□□ 0.59
Upf1Q9EPU0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Upf1Q9EPU0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Upf1Q9EPU0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.73■□□□□ 0.59
Upf1Q9EPU0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upf1Q9EPU0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upf1Q9EPU0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upf1Q9EPU0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upf1Q9EPU0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upf1Q9EPU0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upf1Q9EPU0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upf1Q9EPU0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upf1Q9EPU0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Upf1Q9EPU0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upf1Q9EPU0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.72■□□□□ 0.59
Upf1Q9EPU0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Upf1Q9EPU0 Gm5177-201ENSMUST00000183092 997 ntBASIC18.72■□□□□ 0.59
Upf1Q9EPU0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC18.72■□□□□ 0.59
Upf1Q9EPU0 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.72■□□□□ 0.59
Upf1Q9EPU0 Gm9899-201ENSMUST00000065519 555 ntBASIC18.72■□□□□ 0.59
Upf1Q9EPU0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upf1Q9EPU0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upf1Q9EPU0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upf1Q9EPU0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upf1Q9EPU0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upf1Q9EPU0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Upf1Q9EPU0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Upf1Q9EPU0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upf1Q9EPU0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
Upf1Q9EPU0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Upf1Q9EPU0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.71■□□□□ 0.59
Upf1Q9EPU0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upf1Q9EPU0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upf1Q9EPU0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upf1Q9EPU0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Upf1Q9EPU0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC18.71■□□□□ 0.59
Upf1Q9EPU0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upf1Q9EPU0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Upf1Q9EPU0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Upf1Q9EPU0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.71■□□□□ 0.59
Upf1Q9EPU0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Upf1Q9EPU0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upf1Q9EPU0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upf1Q9EPU0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upf1Q9EPU0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.71■□□□□ 0.58
Upf1Q9EPU0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Upf1Q9EPU0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upf1Q9EPU0 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.7■□□□□ 0.58
Upf1Q9EPU0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upf1Q9EPU0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upf1Q9EPU0 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC18.7■□□□□ 0.58
Upf1Q9EPU0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC18.7■□□□□ 0.58
Upf1Q9EPU0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Upf1Q9EPU0 Gm20553-201ENSMUST00000204205 844 ntBASIC18.7■□□□□ 0.58
Upf1Q9EPU0 Gm6007-201ENSMUST00000208170 823 ntBASIC18.7■□□□□ 0.58
Upf1Q9EPU0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.7■□□□□ 0.58
Upf1Q9EPU0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC18.7■□□□□ 0.58
Upf1Q9EPU0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upf1Q9EPU0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Upf1Q9EPU0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upf1Q9EPU0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.7■□□□□ 0.58
Upf1Q9EPU0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upf1Q9EPU0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upf1Q9EPU0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upf1Q9EPU0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upf1Q9EPU0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upf1Q9EPU0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Upf1Q9EPU0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upf1Q9EPU0 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Upf1Q9EPU0 Gm7488-201ENSMUST00000117148 684 ntBASIC18.69■□□□□ 0.58
Upf1Q9EPU0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.69■□□□□ 0.58
Upf1Q9EPU0 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC18.69■□□□□ 0.58
Upf1Q9EPU0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Upf1Q9EPU0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.69■□□□□ 0.58
Upf1Q9EPU0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.69■□□□□ 0.58
Upf1Q9EPU0 Mir1938-201ENSMUST00000158746 100 ntBASIC18.69■□□□□ 0.58
Upf1Q9EPU0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Upf1Q9EPU0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upf1Q9EPU0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upf1Q9EPU0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upf1Q9EPU0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upf1Q9EPU0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upf1Q9EPU0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.69■□□□□ 0.58
Upf1Q9EPU0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upf1Q9EPU0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Upf1Q9EPU0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upf1Q9EPU0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upf1Q9EPU0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Upf1Q9EPU0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upf1Q9EPU0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Upf1Q9EPU0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Upf1Q9EPU0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Upf1Q9EPU0 Gm13223-201ENSMUST00000118609 747 ntBASIC18.68■□□□□ 0.58
Upf1Q9EPU0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC18.68■□□□□ 0.58
Upf1Q9EPU0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upf1Q9EPU0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC18.68■□□□□ 0.58
Upf1Q9EPU0 Gm24158-201ENSMUST00000175263 71 ntBASIC18.68■□□□□ 0.58
Upf1Q9EPU0 Gm27618-201ENSMUST00000183671 60 ntBASIC18.68■□□□□ 0.58
Upf1Q9EPU0 AC135669.1-201ENSMUST00000213585 412 ntBASIC18.68■□□□□ 0.58
Upf1Q9EPU0 Gm7787-201ENSMUST00000216858 688 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms