Protein–RNA interactions for Protein: Q9DBF7

Cwc25, Pre-mRNA-splicing factor CWC25 homolog, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cwc25Q9DBF7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Cwc25Q9DBF7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cwc25Q9DBF7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cwc25Q9DBF7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cwc25Q9DBF7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cwc25Q9DBF7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cwc25Q9DBF7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cwc25Q9DBF7 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cwc25Q9DBF7 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cwc25Q9DBF7 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cwc25Q9DBF7 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cwc25Q9DBF7 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.26■□□□□ 0.83
Cwc25Q9DBF7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cwc25Q9DBF7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cwc25Q9DBF7 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cwc25Q9DBF7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cwc25Q9DBF7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cwc25Q9DBF7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Cwc25Q9DBF7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Cwc25Q9DBF7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.25■□□□□ 0.83
Cwc25Q9DBF7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cwc25Q9DBF7 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cwc25Q9DBF7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.25■□□□□ 0.83
Cwc25Q9DBF7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cwc25Q9DBF7 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cwc25Q9DBF7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cwc25Q9DBF7 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Cwc25Q9DBF7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.25■□□□□ 0.83
Cwc25Q9DBF7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.25■□□□□ 0.83
Cwc25Q9DBF7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cwc25Q9DBF7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cwc25Q9DBF7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.25■□□□□ 0.83
Cwc25Q9DBF7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cwc25Q9DBF7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cwc25Q9DBF7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Cwc25Q9DBF7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.25■□□□□ 0.83
Cwc25Q9DBF7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cwc25Q9DBF7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cwc25Q9DBF7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cwc25Q9DBF7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cwc25Q9DBF7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cwc25Q9DBF7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cwc25Q9DBF7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cwc25Q9DBF7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cwc25Q9DBF7 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cwc25Q9DBF7 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.24■□□□□ 0.83
Cwc25Q9DBF7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.24■□□□□ 0.83
Cwc25Q9DBF7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cwc25Q9DBF7 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cwc25Q9DBF7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cwc25Q9DBF7 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cwc25Q9DBF7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cwc25Q9DBF7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cwc25Q9DBF7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Rps4l-201ENSMUST00000071745 943 ntBASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.23■□□□□ 0.83
Cwc25Q9DBF7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cwc25Q9DBF7 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cwc25Q9DBF7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cwc25Q9DBF7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cwc25Q9DBF7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cwc25Q9DBF7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cwc25Q9DBF7 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Cwc25Q9DBF7 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.22■□□□□ 0.83
Cwc25Q9DBF7 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.22■□□□□ 0.83
Cwc25Q9DBF7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cwc25Q9DBF7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Cwc25Q9DBF7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
Cwc25Q9DBF7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cwc25Q9DBF7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cwc25Q9DBF7 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cwc25Q9DBF7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Cwc25Q9DBF7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cwc25Q9DBF7 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.21■□□□□ 0.83
Cwc25Q9DBF7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Cwc25Q9DBF7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cwc25Q9DBF7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cwc25Q9DBF7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms