Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc7Q9D541 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc7Q9D541 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc7Q9D541 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc7Q9D541 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.31■□□□□ 0.68
Ccdc7Q9D541 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccdc7Q9D541 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc7Q9D541 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccdc7Q9D541 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc7Q9D541 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc7Q9D541 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc7Q9D541 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc7Q9D541 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc7Q9D541 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc7Q9D541 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc7Q9D541 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc7Q9D541 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc7Q9D541 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc7Q9D541 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc7Q9D541 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc7Q9D541 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc7Q9D541 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.31■□□□□ 0.68
Ccdc7Q9D541 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc7Q9D541 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccdc7Q9D541 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc7Q9D541 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc7Q9D541 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc7Q9D541 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc7Q9D541 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc7Q9D541 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc7Q9D541 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc7Q9D541 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.3■□□□□ 0.68
Ccdc7Q9D541 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc7Q9D541 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc7Q9D541 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Ccdc7Q9D541 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.3■□□□□ 0.68
Ccdc7Q9D541 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc7Q9D541 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
Ccdc7Q9D541 Gm30025-201ENSMUST00000218555 728 ntBASIC19.3■□□□□ 0.68
Ccdc7Q9D541 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc7Q9D541 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc7Q9D541 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc7Q9D541 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc7Q9D541 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc7Q9D541 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc7Q9D541 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.3■□□□□ 0.68
Ccdc7Q9D541 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc7Q9D541 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc7Q9D541 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc7Q9D541 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc7Q9D541 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc7Q9D541 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc7Q9D541 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.29■□□□□ 0.68
Ccdc7Q9D541 Gm13436-201ENSMUST00000120418 567 ntBASIC19.29■□□□□ 0.68
Ccdc7Q9D541 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Ccdc7Q9D541 Gm13474-201ENSMUST00000122466 815 ntBASIC19.29■□□□□ 0.68
Ccdc7Q9D541 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.29■□□□□ 0.68
Ccdc7Q9D541 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc7Q9D541 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc7Q9D541 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.29■□□□□ 0.68
Ccdc7Q9D541 Gm2274-201ENSMUST00000184539 609 ntBASIC19.29■□□□□ 0.68
Ccdc7Q9D541 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ccdc7Q9D541 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.29■□□□□ 0.68
Ccdc7Q9D541 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc7Q9D541 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc7Q9D541 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc7Q9D541 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc7Q9D541 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc7Q9D541 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc7Q9D541 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc7Q9D541 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc7Q9D541 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc7Q9D541 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc7Q9D541 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc7Q9D541 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc7Q9D541 Gm37055-201ENSMUST00000191866 133 ntBASIC19.28■□□□□ 0.68
Ccdc7Q9D541 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ccdc7Q9D541 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc7Q9D541 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc7Q9D541 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc7Q9D541 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc7Q9D541 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc7Q9D541 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc7Q9D541 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc7Q9D541 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc7Q9D541 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc7Q9D541 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc7Q9D541 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc7Q9D541 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc7Q9D541 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc7Q9D541 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc7Q9D541 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc7Q9D541 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc7Q9D541 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.27■□□□□ 0.68
Ccdc7Q9D541 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc7Q9D541 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc7Q9D541 Gm29707-201ENSMUST00000196325 491 ntBASIC19.27■□□□□ 0.68
Ccdc7Q9D541 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.27■□□□□ 0.68
Ccdc7Q9D541 Gm7213-201ENSMUST00000215977 950 ntBASIC19.27■□□□□ 0.68
Ccdc7Q9D541 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms