Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim13Q9CYB0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim13Q9CYB0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim13Q9CYB0 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim13Q9CYB0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim13Q9CYB0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim13Q9CYB0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim13Q9CYB0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim13Q9CYB0 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.29■□□□□ 0.04
Trim13Q9CYB0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim13Q9CYB0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim13Q9CYB0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trim13Q9CYB0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim13Q9CYB0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim13Q9CYB0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim13Q9CYB0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim13Q9CYB0 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim13Q9CYB0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim13Q9CYB0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim13Q9CYB0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.29■□□□□ 0.04
Trim13Q9CYB0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.29■□□□□ 0.04
Trim13Q9CYB0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim13Q9CYB0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim13Q9CYB0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim13Q9CYB0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Trim13Q9CYB0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim13Q9CYB0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim13Q9CYB0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim13Q9CYB0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim13Q9CYB0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim13Q9CYB0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim13Q9CYB0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim13Q9CYB0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trim13Q9CYB0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim13Q9CYB0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim13Q9CYB0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trim13Q9CYB0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim13Q9CYB0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trim13Q9CYB0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim13Q9CYB0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim13Q9CYB0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim13Q9CYB0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim13Q9CYB0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim13Q9CYB0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trim13Q9CYB0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.28■□□□□ 0.04
Trim13Q9CYB0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim13Q9CYB0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim13Q9CYB0 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.28■□□□□ 0.04
Trim13Q9CYB0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim13Q9CYB0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim13Q9CYB0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trim13Q9CYB0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim13Q9CYB0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim13Q9CYB0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim13Q9CYB0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim13Q9CYB0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim13Q9CYB0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Trim13Q9CYB0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim13Q9CYB0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim13Q9CYB0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.27■□□□□ 0.04
Trim13Q9CYB0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.27■□□□□ 0.04
Trim13Q9CYB0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.27■□□□□ 0.04
Trim13Q9CYB0 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.27■□□□□ 0.04
Trim13Q9CYB0 Gm4974-201ENSMUST00000209974 875 ntBASIC15.27■□□□□ 0.04
Trim13Q9CYB0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim13Q9CYB0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim13Q9CYB0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trim13Q9CYB0 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim13Q9CYB0 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim13Q9CYB0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.27■□□□□ 0.03
Trim13Q9CYB0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim13Q9CYB0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trim13Q9CYB0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim13Q9CYB0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim13Q9CYB0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim13Q9CYB0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim13Q9CYB0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim13Q9CYB0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim13Q9CYB0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim13Q9CYB0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim13Q9CYB0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim13Q9CYB0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim13Q9CYB0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.26■□□□□ 0.03
Trim13Q9CYB0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trim13Q9CYB0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim13Q9CYB0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim13Q9CYB0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim13Q9CYB0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim13Q9CYB0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim13Q9CYB0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim13Q9CYB0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim13Q9CYB0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim13Q9CYB0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trim13Q9CYB0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim13Q9CYB0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim13Q9CYB0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim13Q9CYB0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim13Q9CYB0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms