Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc43Q9CR29 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ccdc43Q9CR29 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc43Q9CR29 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc43Q9CR29 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc43Q9CR29 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc43Q9CR29 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc43Q9CR29 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc43Q9CR29 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc43Q9CR29 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc43Q9CR29 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc43Q9CR29 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc43Q9CR29 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc43Q9CR29 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc43Q9CR29 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.34■□□□□ 0.53
Ccdc43Q9CR29 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc43Q9CR29 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc43Q9CR29 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.34■□□□□ 0.53
Ccdc43Q9CR29 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.34■□□□□ 0.53
Ccdc43Q9CR29 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc43Q9CR29 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc43Q9CR29 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.34■□□□□ 0.53
Ccdc43Q9CR29 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc43Q9CR29 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc43Q9CR29 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc43Q9CR29 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc43Q9CR29 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc43Q9CR29 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc43Q9CR29 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc43Q9CR29 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Ccdc43Q9CR29 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc43Q9CR29 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc43Q9CR29 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.33■□□□□ 0.52
Ccdc43Q9CR29 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.33■□□□□ 0.52
Ccdc43Q9CR29 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc43Q9CR29 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.33■□□□□ 0.52
Ccdc43Q9CR29 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc43Q9CR29 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Ccdc43Q9CR29 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc43Q9CR29 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc43Q9CR29 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc43Q9CR29 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc43Q9CR29 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.33■□□□□ 0.52
Ccdc43Q9CR29 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc43Q9CR29 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc43Q9CR29 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ccdc43Q9CR29 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc43Q9CR29 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Ccdc43Q9CR29 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc43Q9CR29 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms