Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.67■□□□□ 0.26
Lsm7Q9CQQ8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.67■□□□□ 0.26
Lsm7Q9CQQ8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.67■□□□□ 0.26
Lsm7Q9CQQ8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm7Q9CQQ8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm7Q9CQQ8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm7Q9CQQ8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.67■□□□□ 0.26
Lsm7Q9CQQ8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm7Q9CQQ8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm7Q9CQQ8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.67■□□□□ 0.26
Lsm7Q9CQQ8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm7Q9CQQ8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm7Q9CQQ8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm7Q9CQQ8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm7Q9CQQ8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm7Q9CQQ8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm7Q9CQQ8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Lsm7Q9CQQ8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Lsm7Q9CQQ8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm7Q9CQQ8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm7Q9CQQ8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm7Q9CQQ8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.66■□□□□ 0.26
Lsm7Q9CQQ8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm7Q9CQQ8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Lsm7Q9CQQ8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm7Q9CQQ8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Lsm7Q9CQQ8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm7Q9CQQ8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm7Q9CQQ8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm7Q9CQQ8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Lsm7Q9CQQ8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.65■□□□□ 0.26
Lsm7Q9CQQ8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.65■□□□□ 0.26
Lsm7Q9CQQ8 Gm7153-201ENSMUST00000117092 455 ntBASIC16.65■□□□□ 0.26
Lsm7Q9CQQ8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.65■□□□□ 0.26
Lsm7Q9CQQ8 Gm44430-201ENSMUST00000203376 995 ntBASIC16.65■□□□□ 0.26
Lsm7Q9CQQ8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm7Q9CQQ8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm7Q9CQQ8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.65■□□□□ 0.26
Lsm7Q9CQQ8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.65■□□□□ 0.26
Lsm7Q9CQQ8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Lsm7Q9CQQ8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm7Q9CQQ8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Lsm7Q9CQQ8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm7Q9CQQ8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lsm7Q9CQQ8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Lsm7Q9CQQ8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Lsm7Q9CQQ8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm7Q9CQQ8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm7Q9CQQ8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Lsm7Q9CQQ8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm7Q9CQQ8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm7Q9CQQ8 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Lsm7Q9CQQ8 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.63■□□□□ 0.25
Lsm7Q9CQQ8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm7Q9CQQ8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm7Q9CQQ8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Lsm7Q9CQQ8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.63■□□□□ 0.25
Lsm7Q9CQQ8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm7Q9CQQ8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.63■□□□□ 0.25
Lsm7Q9CQQ8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm7Q9CQQ8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm7Q9CQQ8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm7Q9CQQ8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm7Q9CQQ8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Lsm7Q9CQQ8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Lsm7Q9CQQ8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm7Q9CQQ8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm7Q9CQQ8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.62■□□□□ 0.25
Lsm7Q9CQQ8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm7Q9CQQ8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm7Q9CQQ8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm7Q9CQQ8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm7Q9CQQ8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Lsm7Q9CQQ8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm7Q9CQQ8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms