Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.53□□□□□ -0.4
Chchd1Q9CQA6 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chchd1Q9CQA6 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chchd1Q9CQA6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chchd1Q9CQA6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.53□□□□□ -0.4
Chchd1Q9CQA6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chchd1Q9CQA6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Chchd1Q9CQA6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Chchd1Q9CQA6 Gm38205-201ENSMUST00000192243 258 ntBASIC12.53□□□□□ -0.4
Chchd1Q9CQA6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chchd1Q9CQA6 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chchd1Q9CQA6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Chchd1Q9CQA6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Chchd1Q9CQA6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.53□□□□□ -0.4
Chchd1Q9CQA6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chchd1Q9CQA6 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chchd1Q9CQA6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chchd1Q9CQA6 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chchd1Q9CQA6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.53□□□□□ -0.4
Chchd1Q9CQA6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chchd1Q9CQA6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC12.52□□□□□ -0.4
Chchd1Q9CQA6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chchd1Q9CQA6 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chchd1Q9CQA6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chchd1Q9CQA6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chchd1Q9CQA6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chchd1Q9CQA6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chchd1Q9CQA6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Chchd1Q9CQA6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chchd1Q9CQA6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chchd1Q9CQA6 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chchd1Q9CQA6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chchd1Q9CQA6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chchd1Q9CQA6 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chchd1Q9CQA6 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chchd1Q9CQA6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chchd1Q9CQA6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chchd1Q9CQA6 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chchd1Q9CQA6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Gm7417-201ENSMUST00000192950 473 ntBASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Spcs1-204ENSMUST00000226782 949 ntBASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chchd1Q9CQA6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Gm11175-201ENSMUST00000116172 543 ntBASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms