Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdh23Q99PF4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdh23Q99PF4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdh23Q99PF4 Gm13597-201ENSMUST00000121239 375 ntBASIC16.77■□□□□ 0.27
Cdh23Q99PF4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cdh23Q99PF4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdh23Q99PF4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh23Q99PF4 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cdh23Q99PF4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.76■□□□□ 0.27
Cdh23Q99PF4 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.76■□□□□ 0.27
Cdh23Q99PF4 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh23Q99PF4 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cdh23Q99PF4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cdh23Q99PF4 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh23Q99PF4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh23Q99PF4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh23Q99PF4 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cdh23Q99PF4 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.76■□□□□ 0.27
Cdh23Q99PF4 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh23Q99PF4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh23Q99PF4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh23Q99PF4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.76■□□□□ 0.27
Cdh23Q99PF4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh23Q99PF4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh23Q99PF4 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Cdh23Q99PF4 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.75■□□□□ 0.27
Cdh23Q99PF4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh23Q99PF4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh23Q99PF4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.75■□□□□ 0.27
Cdh23Q99PF4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh23Q99PF4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh23Q99PF4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Cdh23Q99PF4 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh23Q99PF4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh23Q99PF4 Gm27494-201ENSMUST00000184735 189 ntBASIC16.75■□□□□ 0.27
Cdh23Q99PF4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cdh23Q99PF4 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh23Q99PF4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh23Q99PF4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh23Q99PF4 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.75■□□□□ 0.27
Cdh23Q99PF4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh23Q99PF4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh23Q99PF4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Cdh23Q99PF4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cdh23Q99PF4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.74■□□□□ 0.27
Cdh23Q99PF4 Gm4899-201ENSMUST00000178708 719 ntBASIC16.74■□□□□ 0.27
Cdh23Q99PF4 Gm44335-201ENSMUST00000196879 141 ntBASIC16.74■□□□□ 0.27
Cdh23Q99PF4 Gm44297-201ENSMUST00000198304 141 ntBASIC16.74■□□□□ 0.27
Cdh23Q99PF4 Gm44346-201ENSMUST00000198851 141 ntBASIC16.74■□□□□ 0.27
Cdh23Q99PF4 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh23Q99PF4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh23Q99PF4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh23Q99PF4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cdh23Q99PF4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh23Q99PF4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh23Q99PF4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh23Q99PF4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh23Q99PF4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.74■□□□□ 0.27
Cdh23Q99PF4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh23Q99PF4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.74■□□□□ 0.27
Cdh23Q99PF4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh23Q99PF4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh23Q99PF4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh23Q99PF4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh23Q99PF4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh23Q99PF4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Cdh23Q99PF4 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh23Q99PF4 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.73■□□□□ 0.27
Cdh23Q99PF4 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.73■□□□□ 0.27
Cdh23Q99PF4 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh23Q99PF4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cdh23Q99PF4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh23Q99PF4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh23Q99PF4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh23Q99PF4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh23Q99PF4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh23Q99PF4 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.73■□□□□ 0.27
Cdh23Q99PF4 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.73■□□□□ 0.27
Cdh23Q99PF4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh23Q99PF4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh23Q99PF4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cdh23Q99PF4 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.72■□□□□ 0.27
Cdh23Q99PF4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh23Q99PF4 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.72■□□□□ 0.27
Cdh23Q99PF4 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh23Q99PF4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh23Q99PF4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh23Q99PF4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh23Q99PF4 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh23Q99PF4 Gm25406-201ENSMUST00000157599 105 ntBASIC16.72■□□□□ 0.27
Cdh23Q99PF4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.72■□□□□ 0.27
Cdh23Q99PF4 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh23Q99PF4 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Cdh23Q99PF4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh23Q99PF4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh23Q99PF4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh23Q99PF4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh23Q99PF4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh23Q99PF4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.72■□□□□ 0.27
Cdh23Q99PF4 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms