Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.17■□□□□ 0.34
Tpgs1Q99MS8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.17■□□□□ 0.34
Tpgs1Q99MS8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Tpgs1Q99MS8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tpgs1Q99MS8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tpgs1Q99MS8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tpgs1Q99MS8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tpgs1Q99MS8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tpgs1Q99MS8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tpgs1Q99MS8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tpgs1Q99MS8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Tpgs1Q99MS8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tpgs1Q99MS8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tpgs1Q99MS8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Tpgs1Q99MS8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tpgs1Q99MS8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tpgs1Q99MS8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tpgs1Q99MS8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tpgs1Q99MS8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tpgs1Q99MS8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tpgs1Q99MS8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tpgs1Q99MS8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.16■□□□□ 0.34
Tpgs1Q99MS8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tpgs1Q99MS8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tpgs1Q99MS8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tpgs1Q99MS8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Tpgs1Q99MS8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tpgs1Q99MS8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tpgs1Q99MS8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tpgs1Q99MS8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 Gm7284-201ENSMUST00000131667 944 ntBASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tpgs1Q99MS8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.14■□□□□ 0.34
Tpgs1Q99MS8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tpgs1Q99MS8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpgs1Q99MS8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpgs1Q99MS8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpgs1Q99MS8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpgs1Q99MS8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpgs1Q99MS8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpgs1Q99MS8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.13■□□□□ 0.33
Tpgs1Q99MS8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpgs1Q99MS8 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.13■□□□□ 0.33
Tpgs1Q99MS8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tpgs1Q99MS8 Olfr129-201ENSMUST00000122318 993 ntBASIC17.13■□□□□ 0.33
Tpgs1Q99MS8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Tpgs1Q99MS8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpgs1Q99MS8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Tpgs1Q99MS8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Tpgs1Q99MS8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tpgs1Q99MS8 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tpgs1Q99MS8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tpgs1Q99MS8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpgs1Q99MS8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpgs1Q99MS8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms