Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Rfc4Q99J62 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Rfc4Q99J62 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.98■□□□□ 0.63
Rfc4Q99J62 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Rfc4Q99J62 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfc4Q99J62 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfc4Q99J62 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfc4Q99J62 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Rfc4Q99J62 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfc4Q99J62 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rfc4Q99J62 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Rfc4Q99J62 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfc4Q99J62 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfc4Q99J62 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Rfc4Q99J62 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfc4Q99J62 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rfc4Q99J62 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfc4Q99J62 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Rfc4Q99J62 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfc4Q99J62 Gm25745-201ENSMUST00000174945 133 ntBASIC18.97■□□□□ 0.63
Rfc4Q99J62 Mir5126-201ENSMUST00000175513 77 ntBASIC18.97■□□□□ 0.63
Rfc4Q99J62 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rfc4Q99J62 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfc4Q99J62 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.97■□□□□ 0.63
Rfc4Q99J62 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rfc4Q99J62 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfc4Q99J62 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.97■□□□□ 0.63
Rfc4Q99J62 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
Rfc4Q99J62 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfc4Q99J62 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfc4Q99J62 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.96■□□□□ 0.63
Rfc4Q99J62 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Rfc4Q99J62 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rfc4Q99J62 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rfc4Q99J62 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfc4Q99J62 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rfc4Q99J62 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.96■□□□□ 0.63
Rfc4Q99J62 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfc4Q99J62 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.96■□□□□ 0.63
Rfc4Q99J62 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.96■□□□□ 0.63
Rfc4Q99J62 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.96■□□□□ 0.63
Rfc4Q99J62 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfc4Q99J62 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfc4Q99J62 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfc4Q99J62 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfc4Q99J62 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfc4Q99J62 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.96■□□□□ 0.63
Rfc4Q99J62 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rfc4Q99J62 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfc4Q99J62 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Rfc4Q99J62 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfc4Q99J62 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfc4Q99J62 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfc4Q99J62 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfc4Q99J62 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfc4Q99J62 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfc4Q99J62 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfc4Q99J62 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfc4Q99J62 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfc4Q99J62 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rfc4Q99J62 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.95■□□□□ 0.62
Rfc4Q99J62 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.95■□□□□ 0.62
Rfc4Q99J62 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.95■□□□□ 0.62
Rfc4Q99J62 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.95■□□□□ 0.62
Rfc4Q99J62 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Rfc4Q99J62 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Rfc4Q99J62 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.94■□□□□ 0.62
Rfc4Q99J62 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfc4Q99J62 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.94■□□□□ 0.62
Rfc4Q99J62 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Rfc4Q99J62 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.94■□□□□ 0.62
Rfc4Q99J62 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfc4Q99J62 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.94■□□□□ 0.62
Rfc4Q99J62 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.94■□□□□ 0.62
Rfc4Q99J62 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.94■□□□□ 0.62
Rfc4Q99J62 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfc4Q99J62 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.94■□□□□ 0.62
Rfc4Q99J62 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.94■□□□□ 0.62
Rfc4Q99J62 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.94■□□□□ 0.62
Rfc4Q99J62 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfc4Q99J62 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfc4Q99J62 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rfc4Q99J62 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfc4Q99J62 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfc4Q99J62 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfc4Q99J62 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.93■□□□□ 0.62
Rfc4Q99J62 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.93■□□□□ 0.62
Rfc4Q99J62 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfc4Q99J62 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfc4Q99J62 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfc4Q99J62 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfc4Q99J62 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfc4Q99J62 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Rfc4Q99J62 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rfc4Q99J62 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfc4Q99J62 Gm5264-201ENSMUST00000190584 848 ntBASIC18.93■□□□□ 0.62
Rfc4Q99J62 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rfc4Q99J62 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.93■□□□□ 0.62
Rfc4Q99J62 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfc4Q99J62 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms