Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Gm2559-201ENSMUST00000201323 363 ntBASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1aQ921W0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Gm26571-201ENSMUST00000181399 666 ntBASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Gm42569-201ENSMUST00000200539 472 ntBASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1aQ921W0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Gm10849-201ENSMUST00000100397 618 ntBASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.59□□□□□ -0.07
Chmp1aQ921W0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Chmp1aQ921W0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chmp1aQ921W0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Chmp1aQ921W0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chmp1aQ921W0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chmp1aQ921W0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Chmp1aQ921W0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chmp1aQ921W0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.58□□□□□ -0.08
Chmp1aQ921W0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.58□□□□□ -0.08
Chmp1aQ921W0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1aQ921W0 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.58□□□□□ -0.08
Chmp1aQ921W0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1aQ921W0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1aQ921W0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Chmp1aQ921W0 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1aQ921W0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Chmp1aQ921W0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms