Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdha11Q91Y19 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha11Q91Y19 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha11Q91Y19 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Pcdha11Q91Y19 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha11Q91Y19 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha11Q91Y19 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdha11Q91Y19 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha11Q91Y19 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Pcdha11Q91Y19 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha11Q91Y19 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha11Q91Y19 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha11Q91Y19 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha11Q91Y19 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha11Q91Y19 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdha11Q91Y19 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdha11Q91Y19 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdha11Q91Y19 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdha11Q91Y19 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdha11Q91Y19 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdha11Q91Y19 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha11Q91Y19 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha11Q91Y19 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.33■□□□□ 0.36
Pcdha11Q91Y19 Gm17807-201ENSMUST00000186869 298 ntBASIC17.33■□□□□ 0.36
Pcdha11Q91Y19 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.33■□□□□ 0.36
Pcdha11Q91Y19 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.33■□□□□ 0.36
Pcdha11Q91Y19 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.33■□□□□ 0.36
Pcdha11Q91Y19 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha11Q91Y19 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Pcdha11Q91Y19 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha11Q91Y19 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha11Q91Y19 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha11Q91Y19 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha11Q91Y19 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha11Q91Y19 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Pcdha11Q91Y19 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Pcdha11Q91Y19 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha11Q91Y19 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha11Q91Y19 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha11Q91Y19 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha11Q91Y19 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Pcdha11Q91Y19 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdha11Q91Y19 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha11Q91Y19 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha11Q91Y19 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdha11Q91Y19 Gm15794-201ENSMUST00000120182 631 ntBASIC17.31■□□□□ 0.36
Pcdha11Q91Y19 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdha11Q91Y19 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Pcdha11Q91Y19 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Pcdha11Q91Y19 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdha11Q91Y19 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdha11Q91Y19 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha11Q91Y19 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha11Q91Y19 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdha11Q91Y19 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha11Q91Y19 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdha11Q91Y19 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha11Q91Y19 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdha11Q91Y19 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha11Q91Y19 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha11Q91Y19 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha11Q91Y19 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha11Q91Y19 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha11Q91Y19 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha11Q91Y19 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdha11Q91Y19 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha11Q91Y19 Gm9103-201ENSMUST00000119371 405 ntBASIC17.3■□□□□ 0.36
Pcdha11Q91Y19 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.3■□□□□ 0.36
Pcdha11Q91Y19 Mir3081-201ENSMUST00000175305 84 ntBASIC17.3■□□□□ 0.36
Pcdha11Q91Y19 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha11Q91Y19 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha11Q91Y19 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha11Q91Y19 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms