Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha9Q91Y11 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha9Q91Y11 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha9Q91Y11 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha9Q91Y11 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha9Q91Y11 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdha9Q91Y11 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha9Q91Y11 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.54■□□□□ 0.4
Pcdha9Q91Y11 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha9Q91Y11 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdha9Q91Y11 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdha9Q91Y11 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha9Q91Y11 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha9Q91Y11 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha9Q91Y11 Gm29518-201ENSMUST00000190858 372 ntBASIC17.54■□□□□ 0.4
Pcdha9Q91Y11 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha9Q91Y11 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha9Q91Y11 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdha9Q91Y11 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha9Q91Y11 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.54■□□□□ 0.4
Pcdha9Q91Y11 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdha9Q91Y11 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha9Q91Y11 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha9Q91Y11 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdha9Q91Y11 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha9Q91Y11 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Gm11950-201ENSMUST00000121615 838 ntBASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pcdha9Q91Y11 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha9Q91Y11 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.52■□□□□ 0.4
Pcdha9Q91Y11 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha9Q91Y11 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha9Q91Y11 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Pcdha9Q91Y11 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha9Q91Y11 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha9Q91Y11 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha9Q91Y11 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pcdha9Q91Y11 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha9Q91Y11 Gm36967-201ENSMUST00000193814 266 ntBASIC17.52■□□□□ 0.4
Pcdha9Q91Y11 Gm17808-201ENSMUST00000200859 894 ntBASIC17.52■□□□□ 0.4
Pcdha9Q91Y11 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha9Q91Y11 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha9Q91Y11 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha9Q91Y11 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha9Q91Y11 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Pcdha9Q91Y11 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha9Q91Y11 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.52■□□□□ 0.4
Pcdha9Q91Y11 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha9Q91Y11 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdha9Q91Y11 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdha9Q91Y11 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdha9Q91Y11 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdha9Q91Y11 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdha9Q91Y11 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha9Q91Y11 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha9Q91Y11 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha9Q91Y11 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha9Q91Y11 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha9Q91Y11 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha9Q91Y11 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pcdha9Q91Y11 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha9Q91Y11 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdha9Q91Y11 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha9Q91Y11 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha9Q91Y11 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha9Q91Y11 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Pcdha9Q91Y11 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha9Q91Y11 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha9Q91Y11 Gm45328-201ENSMUST00000210942 917 ntBASIC17.51■□□□□ 0.39
Pcdha9Q91Y11 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha9Q91Y11 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha9Q91Y11 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms