Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhb5Q91XZ5 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhb5Q91XZ5 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb5Q91XZ5 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb5Q91XZ5 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb5Q91XZ5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb5Q91XZ5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb5Q91XZ5 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Pcdhb5Q91XZ5 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Pcdhb5Q91XZ5 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhb5Q91XZ5 Mir5131-201ENSMUST00000175426 93 ntBASIC19.4■□□□□ 0.7
Pcdhb5Q91XZ5 Gm10060-201ENSMUST00000212002 111 ntBASIC19.4■□□□□ 0.7
Pcdhb5Q91XZ5 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb5Q91XZ5 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb5Q91XZ5 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Pcdhb5Q91XZ5 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb5Q91XZ5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb5Q91XZ5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhb5Q91XZ5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb5Q91XZ5 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb5Q91XZ5 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhb5Q91XZ5 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb5Q91XZ5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhb5Q91XZ5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhb5Q91XZ5 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhb5Q91XZ5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Pcdhb5Q91XZ5 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhb5Q91XZ5 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhb5Q91XZ5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb5Q91XZ5 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb5Q91XZ5 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Pcdhb5Q91XZ5 Gm7506-201ENSMUST00000207758 815 ntBASIC19.39■□□□□ 0.69
Pcdhb5Q91XZ5 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.39■□□□□ 0.69
Pcdhb5Q91XZ5 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb5Q91XZ5 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb5Q91XZ5 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb5Q91XZ5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb5Q91XZ5 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb5Q91XZ5 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb5Q91XZ5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb5Q91XZ5 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb5Q91XZ5 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcdhb5Q91XZ5 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Pcdhb5Q91XZ5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb5Q91XZ5 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb5Q91XZ5 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb5Q91XZ5 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Pcdhb5Q91XZ5 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhb5Q91XZ5 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhb5Q91XZ5 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb5Q91XZ5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb5Q91XZ5 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.38■□□□□ 0.69
Pcdhb5Q91XZ5 Gm27525-201ENSMUST00000184465 107 ntBASIC19.38■□□□□ 0.69
Pcdhb5Q91XZ5 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb5Q91XZ5 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Pcdhb5Q91XZ5 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb5Q91XZ5 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb5Q91XZ5 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb5Q91XZ5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb5Q91XZ5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhb5Q91XZ5 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb5Q91XZ5 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb5Q91XZ5 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb5Q91XZ5 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb5Q91XZ5 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb5Q91XZ5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb5Q91XZ5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb5Q91XZ5 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb5Q91XZ5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb5Q91XZ5 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb5Q91XZ5 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb5Q91XZ5 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb5Q91XZ5 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb5Q91XZ5 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb5Q91XZ5 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pcdhb5Q91XZ5 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb5Q91XZ5 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb5Q91XZ5 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb5Q91XZ5 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.37■□□□□ 0.69
Pcdhb5Q91XZ5 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdhb5Q91XZ5 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms