Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb6Q91XZ4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb6Q91XZ4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhb6Q91XZ4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb6Q91XZ4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb6Q91XZ4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb6Q91XZ4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Pcdhb6Q91XZ4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb6Q91XZ4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb6Q91XZ4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhb6Q91XZ4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb6Q91XZ4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Pcdhb6Q91XZ4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb6Q91XZ4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Pcdhb6Q91XZ4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdhb6Q91XZ4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb6Q91XZ4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb6Q91XZ4 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb6Q91XZ4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb6Q91XZ4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb6Q91XZ4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhb6Q91XZ4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb6Q91XZ4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.96■□□□□ 0.31
Pcdhb6Q91XZ4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb6Q91XZ4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Pcdhb6Q91XZ4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb6Q91XZ4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb6Q91XZ4 Gm10231-201ENSMUST00000181584 441 ntBASIC16.96■□□□□ 0.31
Pcdhb6Q91XZ4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb6Q91XZ4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Pcdhb6Q91XZ4 Gm37722-201ENSMUST00000193757 208 ntBASIC16.96■□□□□ 0.31
Pcdhb6Q91XZ4 Gm10175-202ENSMUST00000208752 441 ntBASIC16.96■□□□□ 0.31
Pcdhb6Q91XZ4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb6Q91XZ4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb6Q91XZ4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb6Q91XZ4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb6Q91XZ4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Pcdhb6Q91XZ4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb6Q91XZ4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb6Q91XZ4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhb6Q91XZ4 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhb6Q91XZ4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhb6Q91XZ4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhb6Q91XZ4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Pcdhb6Q91XZ4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.96■□□□□ 0.3
Pcdhb6Q91XZ4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.96■□□□□ 0.3
Pcdhb6Q91XZ4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhb6Q91XZ4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhb6Q91XZ4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb6Q91XZ4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb6Q91XZ4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.94■□□□□ 0.3
Pcdhb6Q91XZ4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb6Q91XZ4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb6Q91XZ4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Pcdhb6Q91XZ4 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.94■□□□□ 0.3
Pcdhb6Q91XZ4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.94■□□□□ 0.3
Pcdhb6Q91XZ4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.94■□□□□ 0.3
Pcdhb6Q91XZ4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Pcdhb6Q91XZ4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb6Q91XZ4 Gm36967-201ENSMUST00000193814 266 ntBASIC16.94■□□□□ 0.3
Pcdhb6Q91XZ4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb6Q91XZ4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb6Q91XZ4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhb6Q91XZ4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms