Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdhga11Q91XY8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhga11Q91XY8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga11Q91XY8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga11Q91XY8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.94■□□□□ 0.14
Pcdhga11Q91XY8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga11Q91XY8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Pcdhga11Q91XY8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga11Q91XY8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga11Q91XY8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga11Q91XY8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga11Q91XY8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga11Q91XY8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga11Q91XY8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdhga11Q91XY8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga11Q91XY8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga11Q91XY8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga11Q91XY8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga11Q91XY8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga11Q91XY8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga11Q91XY8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga11Q91XY8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga11Q91XY8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga11Q91XY8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga11Q91XY8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga11Q91XY8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga11Q91XY8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhga11Q91XY8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga11Q91XY8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.93■□□□□ 0.14
Pcdhga11Q91XY8 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.93■□□□□ 0.14
Pcdhga11Q91XY8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga11Q91XY8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga11Q91XY8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga11Q91XY8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga11Q91XY8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga11Q91XY8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga11Q91XY8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga11Q91XY8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga11Q91XY8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga11Q91XY8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Gm30025-201ENSMUST00000218555 728 ntBASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga11Q91XY8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms