Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga9Q91XX9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga9Q91XX9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga9Q91XX9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga9Q91XX9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga9Q91XX9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga9Q91XX9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga9Q91XX9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga9Q91XX9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Pcdhga9Q91XX9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhga9Q91XX9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhga9Q91XX9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Gm11355-201ENSMUST00000121120 306 ntBASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga9Q91XX9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga9Q91XX9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga9Q91XX9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhga9Q91XX9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhga9Q91XX9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga9Q91XX9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga9Q91XX9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga9Q91XX9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga9Q91XX9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Pcdhga9Q91XX9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga9Q91XX9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga9Q91XX9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga9Q91XX9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga9Q91XX9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga9Q91XX9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga9Q91XX9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga9Q91XX9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.31■□□□□ 0.2
Pcdhga9Q91XX9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga9Q91XX9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhga9Q91XX9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhga9Q91XX9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhga9Q91XX9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga9Q91XX9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga9Q91XX9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhga9Q91XX9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Pcdhga9Q91XX9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga9Q91XX9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Pcdhga9Q91XX9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga9Q91XX9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhga9Q91XX9 Gm27704-201ENSMUST00000185094 107 ntBASIC16.3■□□□□ 0.2
Pcdhga9Q91XX9 Gm29518-201ENSMUST00000190858 372 ntBASIC16.3■□□□□ 0.2
Pcdhga9Q91XX9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga9Q91XX9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga9Q91XX9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga9Q91XX9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga9Q91XX9 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.3■□□□□ 0.2
Pcdhga9Q91XX9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhga9Q91XX9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga9Q91XX9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga9Q91XX9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga9Q91XX9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga9Q91XX9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.29■□□□□ 0.2
Pcdhga9Q91XX9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga9Q91XX9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga9Q91XX9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhga9Q91XX9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga9Q91XX9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga9Q91XX9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Pcdhga9Q91XX9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.29■□□□□ 0.2
Pcdhga9Q91XX9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.29■□□□□ 0.2
Pcdhga9Q91XX9 Gm18421-201ENSMUST00000204122 625 ntBASIC16.29■□□□□ 0.2
Pcdhga9Q91XX9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.29■□□□□ 0.2
Pcdhga9Q91XX9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga9Q91XX9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga9Q91XX9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga9Q91XX9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga9Q91XX9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhga9Q91XX9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhga9Q91XX9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga9Q91XX9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms