Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tram1Q91V04 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tram1Q91V04 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tram1Q91V04 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tram1Q91V04 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tram1Q91V04 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tram1Q91V04 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tram1Q91V04 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tram1Q91V04 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tram1Q91V04 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Tram1Q91V04 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tram1Q91V04 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tram1Q91V04 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.24□□□□□ -0.13
Tram1Q91V04 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Tram1Q91V04 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tram1Q91V04 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tram1Q91V04 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tram1Q91V04 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.24□□□□□ -0.13
Tram1Q91V04 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.24□□□□□ -0.13
Tram1Q91V04 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tram1Q91V04 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tram1Q91V04 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tram1Q91V04 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tram1Q91V04 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.24□□□□□ -0.13
Tram1Q91V04 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tram1Q91V04 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Tram1Q91V04 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Tram1Q91V04 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tram1Q91V04 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.24□□□□□ -0.13
Tram1Q91V04 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tram1Q91V04 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tram1Q91V04 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tram1Q91V04 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tram1Q91V04 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Tram1Q91V04 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tram1Q91V04 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tram1Q91V04 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.24□□□□□ -0.13
Tram1Q91V04 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tram1Q91V04 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tram1Q91V04 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Tram1Q91V04 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tram1Q91V04 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tram1Q91V04 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Tram1Q91V04 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.23□□□□□ -0.13
Tram1Q91V04 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.23□□□□□ -0.13
Tram1Q91V04 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.23□□□□□ -0.13
Tram1Q91V04 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.23□□□□□ -0.13
Tram1Q91V04 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tram1Q91V04 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tram1Q91V04 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Tram1Q91V04 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Tram1Q91V04 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tram1Q91V04 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tram1Q91V04 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.23□□□□□ -0.13
Tram1Q91V04 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.23□□□□□ -0.13
Tram1Q91V04 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tram1Q91V04 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tram1Q91V04 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tram1Q91V04 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tram1Q91V04 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tram1Q91V04 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tram1Q91V04 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tram1Q91V04 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tram1Q91V04 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tram1Q91V04 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tram1Q91V04 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Tram1Q91V04 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tram1Q91V04 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tram1Q91V04 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tram1Q91V04 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.23□□□□□ -0.13
Tram1Q91V04 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tram1Q91V04 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tram1Q91V04 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tram1Q91V04 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Tram1Q91V04 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Tram1Q91V04 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tram1Q91V04 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tram1Q91V04 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tram1Q91V04 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.22□□□□□ -0.13
Tram1Q91V04 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tram1Q91V04 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tram1Q91V04 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tram1Q91V04 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.22□□□□□ -0.13
Tram1Q91V04 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Tram1Q91V04 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tram1Q91V04 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.22□□□□□ -0.13
Tram1Q91V04 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tram1Q91V04 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tram1Q91V04 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Tram1Q91V04 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tram1Q91V04 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Tram1Q91V04 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tram1Q91V04 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tram1Q91V04 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.22□□□□□ -0.13
Tram1Q91V04 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tram1Q91V04 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tram1Q91V04 Mtag2-201ENSMUST00000058665 714 ntBASIC14.22□□□□□ -0.13
Tram1Q91V04 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tram1Q91V04 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.22□□□□□ -0.13
Tram1Q91V04 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms