Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpa1Q8VEE4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rpa1Q8VEE4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpa1Q8VEE4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Rpa1Q8VEE4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpa1Q8VEE4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpa1Q8VEE4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Gm13148-201ENSMUST00000118892 745 ntBASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpa1Q8VEE4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rpa1Q8VEE4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpa1Q8VEE4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rpa1Q8VEE4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpa1Q8VEE4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpa1Q8VEE4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rpa1Q8VEE4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.66■□□□□ 0.26
Rpa1Q8VEE4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rpa1Q8VEE4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpa1Q8VEE4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpa1Q8VEE4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpa1Q8VEE4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpa1Q8VEE4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpa1Q8VEE4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpa1Q8VEE4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Gm10602-201ENSMUST00000098239 609 ntBASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.65■□□□□ 0.26
Rpa1Q8VEE4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rpa1Q8VEE4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rpa1Q8VEE4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rpa1Q8VEE4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa1Q8VEE4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.64■□□□□ 0.25
Rpa1Q8VEE4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa1Q8VEE4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa1Q8VEE4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.64■□□□□ 0.25
Rpa1Q8VEE4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa1Q8VEE4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.64■□□□□ 0.25
Rpa1Q8VEE4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa1Q8VEE4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa1Q8VEE4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa1Q8VEE4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa1Q8VEE4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa1Q8VEE4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa1Q8VEE4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Rpa1Q8VEE4 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa1Q8VEE4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa1Q8VEE4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Rpa1Q8VEE4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms