Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Smg8Q8VE18 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.55■□□□□ 0.4
Smg8Q8VE18 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smg8Q8VE18 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.55■□□□□ 0.4
Smg8Q8VE18 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smg8Q8VE18 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smg8Q8VE18 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smg8Q8VE18 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Smg8Q8VE18 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smg8Q8VE18 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smg8Q8VE18 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smg8Q8VE18 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Smg8Q8VE18 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Smg8Q8VE18 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smg8Q8VE18 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smg8Q8VE18 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Smg8Q8VE18 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smg8Q8VE18 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smg8Q8VE18 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smg8Q8VE18 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smg8Q8VE18 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smg8Q8VE18 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smg8Q8VE18 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smg8Q8VE18 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smg8Q8VE18 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smg8Q8VE18 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.54■□□□□ 0.4
Smg8Q8VE18 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smg8Q8VE18 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smg8Q8VE18 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.54■□□□□ 0.4
Smg8Q8VE18 Gm44771-201ENSMUST00000206975 626 ntBASIC17.54■□□□□ 0.4
Smg8Q8VE18 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smg8Q8VE18 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smg8Q8VE18 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smg8Q8VE18 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smg8Q8VE18 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smg8Q8VE18 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smg8Q8VE18 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smg8Q8VE18 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smg8Q8VE18 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smg8Q8VE18 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smg8Q8VE18 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.53■□□□□ 0.4
Smg8Q8VE18 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smg8Q8VE18 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smg8Q8VE18 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smg8Q8VE18 Gm11452-201ENSMUST00000122376 690 ntBASIC17.53■□□□□ 0.4
Smg8Q8VE18 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smg8Q8VE18 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.53■□□□□ 0.4
Smg8Q8VE18 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smg8Q8VE18 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.53■□□□□ 0.4
Smg8Q8VE18 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.53■□□□□ 0.4
Smg8Q8VE18 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smg8Q8VE18 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smg8Q8VE18 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smg8Q8VE18 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.53■□□□□ 0.4
Smg8Q8VE18 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Smg8Q8VE18 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smg8Q8VE18 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smg8Q8VE18 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Smg8Q8VE18 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smg8Q8VE18 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Smg8Q8VE18 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Smg8Q8VE18 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Smg8Q8VE18 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smg8Q8VE18 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smg8Q8VE18 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smg8Q8VE18 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.52■□□□□ 0.4
Smg8Q8VE18 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smg8Q8VE18 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Smg8Q8VE18 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.52■□□□□ 0.4
Smg8Q8VE18 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smg8Q8VE18 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smg8Q8VE18 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.52■□□□□ 0.4
Smg8Q8VE18 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Smg8Q8VE18 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smg8Q8VE18 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smg8Q8VE18 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smg8Q8VE18 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smg8Q8VE18 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Smg8Q8VE18 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smg8Q8VE18 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smg8Q8VE18 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smg8Q8VE18 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smg8Q8VE18 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.51■□□□□ 0.39
Smg8Q8VE18 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smg8Q8VE18 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.51■□□□□ 0.39
Smg8Q8VE18 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smg8Q8VE18 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.51■□□□□ 0.39
Smg8Q8VE18 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.51■□□□□ 0.39
Smg8Q8VE18 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.51■□□□□ 0.39
Smg8Q8VE18 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smg8Q8VE18 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smg8Q8VE18 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Smg8Q8VE18 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smg8Q8VE18 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smg8Q8VE18 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Smg8Q8VE18 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Smg8Q8VE18 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smg8Q8VE18 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smg8Q8VE18 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smg8Q8VE18 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms