Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdt1Q8R4E9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdt1Q8R4E9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Cdt1Q8R4E9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cdt1Q8R4E9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cdt1Q8R4E9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Cdt1Q8R4E9 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.95■□□□□ 0.14
Cdt1Q8R4E9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdt1Q8R4E9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdt1Q8R4E9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Cdt1Q8R4E9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdt1Q8R4E9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdt1Q8R4E9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdt1Q8R4E9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Cdt1Q8R4E9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdt1Q8R4E9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Cdt1Q8R4E9 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.95■□□□□ 0.14
Cdt1Q8R4E9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdt1Q8R4E9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdt1Q8R4E9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdt1Q8R4E9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Cdt1Q8R4E9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.95■□□□□ 0.14
Cdt1Q8R4E9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdt1Q8R4E9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdt1Q8R4E9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.95■□□□□ 0.14
Cdt1Q8R4E9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdt1Q8R4E9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdt1Q8R4E9 Haglr-201ENSMUST00000100000 2085 ntBASIC15.95■□□□□ 0.14
Cdt1Q8R4E9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Gm43514-201ENSMUST00000198852 424 ntBASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdt1Q8R4E9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdt1Q8R4E9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdt1Q8R4E9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdt1Q8R4E9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Cdt1Q8R4E9 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.93■□□□□ 0.14
Cdt1Q8R4E9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.93■□□□□ 0.14
Cdt1Q8R4E9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdt1Q8R4E9 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.93■□□□□ 0.14
Cdt1Q8R4E9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Cdt1Q8R4E9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdt1Q8R4E9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.93■□□□□ 0.14
Cdt1Q8R4E9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdt1Q8R4E9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdt1Q8R4E9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Cdt1Q8R4E9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdt1Q8R4E9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdt1Q8R4E9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Cdt1Q8R4E9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdt1Q8R4E9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdt1Q8R4E9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdt1Q8R4E9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdt1Q8R4E9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdt1Q8R4E9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdt1Q8R4E9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdt1Q8R4E9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Cdt1Q8R4E9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Cdt1Q8R4E9 Gm13216-201ENSMUST00000117145 591 ntBASIC15.92■□□□□ 0.14
Cdt1Q8R4E9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.92■□□□□ 0.14
Cdt1Q8R4E9 Gm25925-201ENSMUST00000158314 306 ntBASIC15.92■□□□□ 0.14
Cdt1Q8R4E9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Cdt1Q8R4E9 Gm6443-201ENSMUST00000203599 874 ntBASIC15.92■□□□□ 0.14
Cdt1Q8R4E9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.92■□□□□ 0.14
Cdt1Q8R4E9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdt1Q8R4E9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 296.8 ms