Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 Gm29518-201ENSMUST00000190858 372 ntBASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vmn1r28Q8R2C9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vmn1r28Q8R2C9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vmn1r28Q8R2C9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vmn1r28Q8R2C9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Vmn1r28Q8R2C9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
Vmn1r28Q8R2C9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
Vmn1r28Q8R2C9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Vmn1r28Q8R2C9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vmn1r28Q8R2C9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.16■□□□□ 0.02
Vmn1r28Q8R2C9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.16■□□□□ 0.02
Vmn1r28Q8R2C9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.16■□□□□ 0.02
Vmn1r28Q8R2C9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.16■□□□□ 0.02
Vmn1r28Q8R2C9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vmn1r28Q8R2C9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vmn1r28Q8R2C9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vmn1r28Q8R2C9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vmn1r28Q8R2C9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vmn1r28Q8R2C9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vmn1r28Q8R2C9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vmn1r28Q8R2C9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vmn1r28Q8R2C9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vmn1r28Q8R2C9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vmn1r28Q8R2C9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vmn1r28Q8R2C9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Vmn1r28Q8R2C9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 Gm11950-201ENSMUST00000121615 838 ntBASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 Gm33142-201ENSMUST00000193913 867 ntBASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 Gm29707-201ENSMUST00000196325 491 ntBASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms