Protein–RNA interactions for Protein: Q8K2T8

Paf1, RNA polymerase II-associated factor 1 homolog, mousemouse

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Paf1Q8K2T8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Paf1Q8K2T8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Paf1Q8K2T8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.32■□□□□ 0.68
Paf1Q8K2T8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Paf1Q8K2T8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Paf1Q8K2T8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Paf1Q8K2T8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Paf1Q8K2T8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.32■□□□□ 0.68
Paf1Q8K2T8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Paf1Q8K2T8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Paf1Q8K2T8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Paf1Q8K2T8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Paf1Q8K2T8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Paf1Q8K2T8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Paf1Q8K2T8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Paf1Q8K2T8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Paf1Q8K2T8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Paf1Q8K2T8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Paf1Q8K2T8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Paf1Q8K2T8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Paf1Q8K2T8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.31■□□□□ 0.68
Paf1Q8K2T8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Paf1Q8K2T8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Paf1Q8K2T8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Paf1Q8K2T8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Paf1Q8K2T8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Paf1Q8K2T8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Paf1Q8K2T8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.31■□□□□ 0.68
Paf1Q8K2T8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Paf1Q8K2T8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Paf1Q8K2T8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Paf1Q8K2T8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Paf1Q8K2T8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Paf1Q8K2T8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Paf1Q8K2T8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Paf1Q8K2T8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Paf1Q8K2T8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Paf1Q8K2T8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Paf1Q8K2T8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Paf1Q8K2T8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Paf1Q8K2T8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Paf1Q8K2T8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Paf1Q8K2T8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.3■□□□□ 0.68
Paf1Q8K2T8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Paf1Q8K2T8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.3■□□□□ 0.68
Paf1Q8K2T8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.3■□□□□ 0.68
Paf1Q8K2T8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.3■□□□□ 0.68
Paf1Q8K2T8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Paf1Q8K2T8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.3■□□□□ 0.68
Paf1Q8K2T8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Paf1Q8K2T8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Paf1Q8K2T8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
Paf1Q8K2T8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Paf1Q8K2T8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
Paf1Q8K2T8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Paf1Q8K2T8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Paf1Q8K2T8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Paf1Q8K2T8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Paf1Q8K2T8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Paf1Q8K2T8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Paf1Q8K2T8 Gm25016-201ENSMUST00000158399 131 ntBASIC19.29■□□□□ 0.68
Paf1Q8K2T8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.29■□□□□ 0.68
Paf1Q8K2T8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Paf1Q8K2T8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Paf1Q8K2T8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Paf1Q8K2T8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Paf1Q8K2T8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Paf1Q8K2T8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Paf1Q8K2T8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Paf1Q8K2T8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Paf1Q8K2T8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Paf1Q8K2T8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Paf1Q8K2T8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Paf1Q8K2T8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Paf1Q8K2T8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Paf1Q8K2T8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Paf1Q8K2T8 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.28■□□□□ 0.68
Paf1Q8K2T8 AA414768-201ENSMUST00000121924 1257 ntBASIC19.28■□□□□ 0.68
Paf1Q8K2T8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.28■□□□□ 0.68
Paf1Q8K2T8 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.28■□□□□ 0.68
Paf1Q8K2T8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Paf1Q8K2T8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.28■□□□□ 0.68
Paf1Q8K2T8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Paf1Q8K2T8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Paf1Q8K2T8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Paf1Q8K2T8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Paf1Q8K2T8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Paf1Q8K2T8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Paf1Q8K2T8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Paf1Q8K2T8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Paf1Q8K2T8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Paf1Q8K2T8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Paf1Q8K2T8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.27■□□□□ 0.68
Paf1Q8K2T8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Paf1Q8K2T8 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.27■□□□□ 0.68
Paf1Q8K2T8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Paf1Q8K2T8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Paf1Q8K2T8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Paf1Q8K2T8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Paf1Q8K2T8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms