Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cchcr1Q8K2I2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Cchcr1Q8K2I2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cchcr1Q8K2I2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cchcr1Q8K2I2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cchcr1Q8K2I2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.51■□□□□ 0.71
Cchcr1Q8K2I2 Dancr-204ENSMUST00000132389 2347 ntBASIC19.51■□□□□ 0.71
Cchcr1Q8K2I2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cchcr1Q8K2I2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cchcr1Q8K2I2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cchcr1Q8K2I2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.51■□□□□ 0.71
Cchcr1Q8K2I2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cchcr1Q8K2I2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cchcr1Q8K2I2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cchcr1Q8K2I2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.51■□□□□ 0.71
Cchcr1Q8K2I2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cchcr1Q8K2I2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Cchcr1Q8K2I2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cchcr1Q8K2I2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Cchcr1Q8K2I2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cchcr1Q8K2I2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC19.5■□□□□ 0.71
Cchcr1Q8K2I2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cchcr1Q8K2I2 Phf7-203ENSMUST00000226565 1971 ntBASIC19.5■□□□□ 0.71
Cchcr1Q8K2I2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cchcr1Q8K2I2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cchcr1Q8K2I2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cchcr1Q8K2I2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cchcr1Q8K2I2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
Cchcr1Q8K2I2 Gm7370-201ENSMUST00000219471 767 ntBASIC19.5■□□□□ 0.71
Cchcr1Q8K2I2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cchcr1Q8K2I2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cchcr1Q8K2I2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cchcr1Q8K2I2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cchcr1Q8K2I2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cchcr1Q8K2I2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.5■□□□□ 0.71
Cchcr1Q8K2I2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cchcr1Q8K2I2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cchcr1Q8K2I2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.5■□□□□ 0.71
Cchcr1Q8K2I2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cchcr1Q8K2I2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Gm16061-201ENSMUST00000122167 857 ntBASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Gm2274-201ENSMUST00000184539 609 ntBASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Gm30025-201ENSMUST00000218555 728 ntBASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cchcr1Q8K2I2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cchcr1Q8K2I2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cchcr1Q8K2I2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cchcr1Q8K2I2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cchcr1Q8K2I2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cchcr1Q8K2I2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cchcr1Q8K2I2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cchcr1Q8K2I2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cchcr1Q8K2I2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cchcr1Q8K2I2 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.48■□□□□ 0.71
Cchcr1Q8K2I2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cchcr1Q8K2I2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cchcr1Q8K2I2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cchcr1Q8K2I2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Cchcr1Q8K2I2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cchcr1Q8K2I2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cchcr1Q8K2I2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cchcr1Q8K2I2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cchcr1Q8K2I2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.47■□□□□ 0.71
Cchcr1Q8K2I2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms