Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfwd3Q8CIK8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfwd3Q8CIK8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfwd3Q8CIK8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfwd3Q8CIK8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfwd3Q8CIK8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfwd3Q8CIK8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rfwd3Q8CIK8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Rfwd3Q8CIK8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfwd3Q8CIK8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfwd3Q8CIK8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfwd3Q8CIK8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rfwd3Q8CIK8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfwd3Q8CIK8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfwd3Q8CIK8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfwd3Q8CIK8 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.52■□□□□ 0.08
Rfwd3Q8CIK8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfwd3Q8CIK8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfwd3Q8CIK8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rfwd3Q8CIK8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfwd3Q8CIK8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rfwd3Q8CIK8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rfwd3Q8CIK8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfwd3Q8CIK8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfwd3Q8CIK8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfwd3Q8CIK8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rfwd3Q8CIK8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.52■□□□□ 0.07
Rfwd3Q8CIK8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Rfwd3Q8CIK8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfwd3Q8CIK8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Rfwd3Q8CIK8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rfwd3Q8CIK8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfwd3Q8CIK8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfwd3Q8CIK8 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.51■□□□□ 0.07
Rfwd3Q8CIK8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rfwd3Q8CIK8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfwd3Q8CIK8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfwd3Q8CIK8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfwd3Q8CIK8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rfwd3Q8CIK8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfwd3Q8CIK8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Rfwd3Q8CIK8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
Rfwd3Q8CIK8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfwd3Q8CIK8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfwd3Q8CIK8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfwd3Q8CIK8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.51■□□□□ 0.07
Rfwd3Q8CIK8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfwd3Q8CIK8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfwd3Q8CIK8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfwd3Q8CIK8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfwd3Q8CIK8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfwd3Q8CIK8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rfwd3Q8CIK8 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfwd3Q8CIK8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfwd3Q8CIK8 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Rfwd3Q8CIK8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Gm7977-201ENSMUST00000193787 748 ntBASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfwd3Q8CIK8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms