Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CopaQ8CIE6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CopaQ8CIE6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CopaQ8CIE6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.84■□□□□ 0.29
CopaQ8CIE6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CopaQ8CIE6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CopaQ8CIE6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CopaQ8CIE6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CopaQ8CIE6 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CopaQ8CIE6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CopaQ8CIE6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CopaQ8CIE6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CopaQ8CIE6 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.84■□□□□ 0.29
CopaQ8CIE6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CopaQ8CIE6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
CopaQ8CIE6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.83■□□□□ 0.29
CopaQ8CIE6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CopaQ8CIE6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.83■□□□□ 0.28
CopaQ8CIE6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.83■□□□□ 0.28
CopaQ8CIE6 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CopaQ8CIE6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CopaQ8CIE6 Gm5587-201ENSMUST00000206270 674 ntBASIC16.83■□□□□ 0.28
CopaQ8CIE6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CopaQ8CIE6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CopaQ8CIE6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CopaQ8CIE6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CopaQ8CIE6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CopaQ8CIE6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CopaQ8CIE6 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CopaQ8CIE6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CopaQ8CIE6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopaQ8CIE6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopaQ8CIE6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CopaQ8CIE6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CopaQ8CIE6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopaQ8CIE6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CopaQ8CIE6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopaQ8CIE6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopaQ8CIE6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CopaQ8CIE6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopaQ8CIE6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.82■□□□□ 0.28
CopaQ8CIE6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopaQ8CIE6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopaQ8CIE6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopaQ8CIE6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopaQ8CIE6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopaQ8CIE6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopaQ8CIE6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CopaQ8CIE6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CopaQ8CIE6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopaQ8CIE6 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.82■□□□□ 0.28
CopaQ8CIE6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CopaQ8CIE6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.81■□□□□ 0.28
CopaQ8CIE6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CopaQ8CIE6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CopaQ8CIE6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CopaQ8CIE6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CopaQ8CIE6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CopaQ8CIE6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.81■□□□□ 0.28
CopaQ8CIE6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CopaQ8CIE6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CopaQ8CIE6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CopaQ8CIE6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CopaQ8CIE6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CopaQ8CIE6 Gm9013-201ENSMUST00000132939 882 ntBASIC16.81■□□□□ 0.28
CopaQ8CIE6 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.81■□□□□ 0.28
CopaQ8CIE6 Ank2-226ENSMUST00000189368 339 ntBASIC16.81■□□□□ 0.28
CopaQ8CIE6 Gm10566-201ENSMUST00000086739 996 ntBASIC16.81■□□□□ 0.28
CopaQ8CIE6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CopaQ8CIE6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CopaQ8CIE6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CopaQ8CIE6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.81■□□□□ 0.28
CopaQ8CIE6 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CopaQ8CIE6 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CopaQ8CIE6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CopaQ8CIE6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CopaQ8CIE6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CopaQ8CIE6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CopaQ8CIE6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CopaQ8CIE6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CopaQ8CIE6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CopaQ8CIE6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CopaQ8CIE6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CopaQ8CIE6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CopaQ8CIE6 Gm14859-201ENSMUST00000117752 357 ntBASIC16.8■□□□□ 0.28
CopaQ8CIE6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CopaQ8CIE6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.8■□□□□ 0.28
CopaQ8CIE6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CopaQ8CIE6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CopaQ8CIE6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.8■□□□□ 0.28
CopaQ8CIE6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CopaQ8CIE6 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.8■□□□□ 0.28
CopaQ8CIE6 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CopaQ8CIE6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopaQ8CIE6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CopaQ8CIE6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopaQ8CIE6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopaQ8CIE6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CopaQ8CIE6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopaQ8CIE6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms