Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm17661-201ENSMUST00000170317 270 ntBASIC16.65■□□□□ 0.26
Clip4Q8CI96 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clip4Q8CI96 Gm45058-201ENSMUST00000205810 766 ntBASIC16.65■□□□□ 0.26
Clip4Q8CI96 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clip4Q8CI96 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.65■□□□□ 0.26
Clip4Q8CI96 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clip4Q8CI96 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clip4Q8CI96 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clip4Q8CI96 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clip4Q8CI96 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clip4Q8CI96 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clip4Q8CI96 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clip4Q8CI96 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clip4Q8CI96 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.64■□□□□ 0.25
Clip4Q8CI96 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clip4Q8CI96 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clip4Q8CI96 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Clip4Q8CI96 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clip4Q8CI96 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clip4Q8CI96 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clip4Q8CI96 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.64■□□□□ 0.25
Clip4Q8CI96 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clip4Q8CI96 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.64■□□□□ 0.25
Clip4Q8CI96 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clip4Q8CI96 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clip4Q8CI96 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Clip4Q8CI96 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Clip4Q8CI96 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clip4Q8CI96 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clip4Q8CI96 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Clip4Q8CI96 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clip4Q8CI96 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Clip4Q8CI96 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Clip4Q8CI96 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clip4Q8CI96 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clip4Q8CI96 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clip4Q8CI96 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.63■□□□□ 0.25
Clip4Q8CI96 Mir5130-201ENSMUST00000175160 84 ntBASIC16.63■□□□□ 0.25
Clip4Q8CI96 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clip4Q8CI96 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Clip4Q8CI96 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clip4Q8CI96 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clip4Q8CI96 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Clip4Q8CI96 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clip4Q8CI96 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clip4Q8CI96 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.62■□□□□ 0.25
Clip4Q8CI96 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clip4Q8CI96 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clip4Q8CI96 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Clip4Q8CI96 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clip4Q8CI96 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.62■□□□□ 0.25
Clip4Q8CI96 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clip4Q8CI96 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clip4Q8CI96 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Clip4Q8CI96 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Clip4Q8CI96 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Clip4Q8CI96 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clip4Q8CI96 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clip4Q8CI96 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clip4Q8CI96 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Clip4Q8CI96 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clip4Q8CI96 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clip4Q8CI96 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clip4Q8CI96 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.61■□□□□ 0.25
Clip4Q8CI96 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clip4Q8CI96 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clip4Q8CI96 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clip4Q8CI96 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clip4Q8CI96 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clip4Q8CI96 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clip4Q8CI96 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clip4Q8CI96 Gm16061-201ENSMUST00000122167 857 ntBASIC16.61■□□□□ 0.25
Clip4Q8CI96 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clip4Q8CI96 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clip4Q8CI96 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms