Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Smc5Q8CG46 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc5Q8CG46 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc5Q8CG46 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Smc5Q8CG46 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc5Q8CG46 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.43■□□□□ 0.86
Smc5Q8CG46 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc5Q8CG46 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc5Q8CG46 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC20.42■□□□□ 0.86
Smc5Q8CG46 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc5Q8CG46 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc5Q8CG46 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Smc5Q8CG46 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc5Q8CG46 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc5Q8CG46 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.42■□□□□ 0.86
Smc5Q8CG46 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc5Q8CG46 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc5Q8CG46 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Smc5Q8CG46 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.42■□□□□ 0.86
Smc5Q8CG46 Gm20760-201ENSMUST00000179197 648 ntBASIC20.42■□□□□ 0.86
Smc5Q8CG46 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.42■□□□□ 0.86
Smc5Q8CG46 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc5Q8CG46 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smc5Q8CG46 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc5Q8CG46 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc5Q8CG46 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc5Q8CG46 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc5Q8CG46 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc5Q8CG46 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC20.42■□□□□ 0.86
Smc5Q8CG46 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smc5Q8CG46 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.42■□□□□ 0.86
Smc5Q8CG46 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Smc5Q8CG46 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc5Q8CG46 Ccdc166-201ENSMUST00000182172 2584 ntBASIC20.41■□□□□ 0.86
Smc5Q8CG46 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC20.41■□□□□ 0.86
Smc5Q8CG46 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.4■□□□□ 0.86
Smc5Q8CG46 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc5Q8CG46 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.4■□□□□ 0.86
Smc5Q8CG46 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc5Q8CG46 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.4■□□□□ 0.86
Smc5Q8CG46 Gm13168-201ENSMUST00000121771 632 ntBASIC20.4■□□□□ 0.86
Smc5Q8CG46 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smc5Q8CG46 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.4■□□□□ 0.86
Smc5Q8CG46 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smc5Q8CG46 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.4■□□□□ 0.86
Smc5Q8CG46 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc5Q8CG46 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.4■□□□□ 0.86
Smc5Q8CG46 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.4■□□□□ 0.86
Smc5Q8CG46 Gm18115-201ENSMUST00000221209 621 ntBASIC20.4■□□□□ 0.86
Smc5Q8CG46 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
Smc5Q8CG46 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Smc5Q8CG46 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc5Q8CG46 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc5Q8CG46 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc5Q8CG46 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smc5Q8CG46 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Smc5Q8CG46 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc5Q8CG46 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc5Q8CG46 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.4■□□□□ 0.86
Smc5Q8CG46 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Smc5Q8CG46 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc5Q8CG46 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smc5Q8CG46 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Smc5Q8CG46 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smc5Q8CG46 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Smc5Q8CG46 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.86
Smc5Q8CG46 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC20.39■□□□□ 0.86
Smc5Q8CG46 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smc5Q8CG46 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Smc5Q8CG46 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc5Q8CG46 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc5Q8CG46 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.39■□□□□ 0.85
Smc5Q8CG46 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.39■□□□□ 0.85
Smc5Q8CG46 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.39■□□□□ 0.85
Smc5Q8CG46 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.39■□□□□ 0.85
Smc5Q8CG46 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms