Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Vcpip1Q8CDG3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vcpip1Q8CDG3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Vcpip1Q8CDG3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vcpip1Q8CDG3 Gm6433-201ENSMUST00000118634 875 ntBASIC17.75■□□□□ 0.43
Vcpip1Q8CDG3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.75■□□□□ 0.43
Vcpip1Q8CDG3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.75■□□□□ 0.43
Vcpip1Q8CDG3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vcpip1Q8CDG3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Vcpip1Q8CDG3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vcpip1Q8CDG3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.75■□□□□ 0.43
Vcpip1Q8CDG3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vcpip1Q8CDG3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vcpip1Q8CDG3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vcpip1Q8CDG3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.74■□□□□ 0.43
Vcpip1Q8CDG3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vcpip1Q8CDG3 Gm18958-201ENSMUST00000174258 762 ntBASIC17.74■□□□□ 0.43
Vcpip1Q8CDG3 Gm10231-201ENSMUST00000181584 441 ntBASIC17.74■□□□□ 0.43
Vcpip1Q8CDG3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vcpip1Q8CDG3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vcpip1Q8CDG3 Gm43799-201ENSMUST00000201845 579 ntBASIC17.74■□□□□ 0.43
Vcpip1Q8CDG3 Gm10175-202ENSMUST00000208752 441 ntBASIC17.74■□□□□ 0.43
Vcpip1Q8CDG3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vcpip1Q8CDG3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vcpip1Q8CDG3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vcpip1Q8CDG3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vcpip1Q8CDG3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vcpip1Q8CDG3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vcpip1Q8CDG3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Vcpip1Q8CDG3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vcpip1Q8CDG3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vcpip1Q8CDG3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vcpip1Q8CDG3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vcpip1Q8CDG3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vcpip1Q8CDG3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vcpip1Q8CDG3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vcpip1Q8CDG3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Vcpip1Q8CDG3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vcpip1Q8CDG3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vcpip1Q8CDG3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.73■□□□□ 0.43
Vcpip1Q8CDG3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vcpip1Q8CDG3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.73■□□□□ 0.43
Vcpip1Q8CDG3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vcpip1Q8CDG3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vcpip1Q8CDG3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vcpip1Q8CDG3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vcpip1Q8CDG3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Vcpip1Q8CDG3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vcpip1Q8CDG3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vcpip1Q8CDG3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vcpip1Q8CDG3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vcpip1Q8CDG3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vcpip1Q8CDG3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Gm27463-201ENSMUST00000183569 57 ntBASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Gm5417-201ENSMUST00000079706 384 ntBASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcpip1Q8CDG3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vcpip1Q8CDG3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vcpip1Q8CDG3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.71■□□□□ 0.43
Vcpip1Q8CDG3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Vcpip1Q8CDG3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vcpip1Q8CDG3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vcpip1Q8CDG3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.71■□□□□ 0.43
Vcpip1Q8CDG3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.71■□□□□ 0.43
Vcpip1Q8CDG3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.71■□□□□ 0.43
Vcpip1Q8CDG3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.71■□□□□ 0.43
Vcpip1Q8CDG3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.71■□□□□ 0.43
Vcpip1Q8CDG3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.71■□□□□ 0.43
Vcpip1Q8CDG3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vcpip1Q8CDG3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Vcpip1Q8CDG3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Vcpip1Q8CDG3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.71■□□□□ 0.43
Vcpip1Q8CDG3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vcpip1Q8CDG3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vcpip1Q8CDG3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vcpip1Q8CDG3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vcpip1Q8CDG3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.71■□□□□ 0.42
Vcpip1Q8CDG3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vcpip1Q8CDG3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vcpip1Q8CDG3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms