Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ubr7Q8BU04 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr7Q8BU04 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.62■□□□□ 0.25
Ubr7Q8BU04 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.62■□□□□ 0.25
Ubr7Q8BU04 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Ubr7Q8BU04 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr7Q8BU04 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr7Q8BU04 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Ubr7Q8BU04 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr7Q8BU04 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Birc2-201ENSMUST00000054878 378 ntBASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr7Q8BU04 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Gm7153-201ENSMUST00000117092 455 ntBASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
Ubr7Q8BU04 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr7Q8BU04 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr7Q8BU04 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr7Q8BU04 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr7Q8BU04 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr7Q8BU04 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr7Q8BU04 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr7Q8BU04 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.59■□□□□ 0.25
Ubr7Q8BU04 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.59■□□□□ 0.25
Ubr7Q8BU04 Gm7461-201ENSMUST00000058918 827 ntBASIC16.59■□□□□ 0.25
Ubr7Q8BU04 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr7Q8BU04 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr7Q8BU04 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ubr7Q8BU04 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ubr7Q8BU04 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr7Q8BU04 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.59■□□□□ 0.25
Ubr7Q8BU04 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr7Q8BU04 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr7Q8BU04 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr7Q8BU04 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr7Q8BU04 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.59■□□□□ 0.25
Ubr7Q8BU04 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubr7Q8BU04 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.58■□□□□ 0.25
Ubr7Q8BU04 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.58■□□□□ 0.25
Ubr7Q8BU04 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubr7Q8BU04 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Ubr7Q8BU04 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubr7Q8BU04 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubr7Q8BU04 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Ubr7Q8BU04 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Ubr7Q8BU04 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Ubr7Q8BU04 Gm24589-201ENSMUST00000116692 94 ntBASIC16.58■□□□□ 0.24
Ubr7Q8BU04 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.58■□□□□ 0.24
Ubr7Q8BU04 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.58■□□□□ 0.24
Ubr7Q8BU04 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubr7Q8BU04 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.58■□□□□ 0.24
Ubr7Q8BU04 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms