Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpsf7Q8BTV2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cpsf7Q8BTV2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cpsf7Q8BTV2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpsf7Q8BTV2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpsf7Q8BTV2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cpsf7Q8BTV2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpsf7Q8BTV2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpsf7Q8BTV2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cpsf7Q8BTV2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.55■□□□□ 0.24
Cpsf7Q8BTV2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Gm12382-201ENSMUST00000122005 922 ntBASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf7Q8BTV2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf7Q8BTV2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf7Q8BTV2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.53■□□□□ 0.24
Cpsf7Q8BTV2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf7Q8BTV2 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf7Q8BTV2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf7Q8BTV2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf7Q8BTV2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.53■□□□□ 0.24
Cpsf7Q8BTV2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf7Q8BTV2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf7Q8BTV2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf7Q8BTV2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf7Q8BTV2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf7Q8BTV2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf7Q8BTV2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf7Q8BTV2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf7Q8BTV2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf7Q8BTV2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf7Q8BTV2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf7Q8BTV2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf7Q8BTV2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf7Q8BTV2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf7Q8BTV2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf7Q8BTV2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpsf7Q8BTV2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Cpsf7Q8BTV2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpsf7Q8BTV2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cpsf7Q8BTV2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpsf7Q8BTV2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpsf7Q8BTV2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpsf7Q8BTV2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpsf7Q8BTV2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cpsf7Q8BTV2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpsf7Q8BTV2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpsf7Q8BTV2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpsf7Q8BTV2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpsf7Q8BTV2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cpsf7Q8BTV2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cpsf7Q8BTV2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cpsf7Q8BTV2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpsf7Q8BTV2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cpsf7Q8BTV2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.52■□□□□ 0.24
Cpsf7Q8BTV2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Cpsf7Q8BTV2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cpsf7Q8BTV2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cpsf7Q8BTV2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cpsf7Q8BTV2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cpsf7Q8BTV2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cpsf7Q8BTV2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf7Q8BTV2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf7Q8BTV2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf7Q8BTV2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf7Q8BTV2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf7Q8BTV2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf7Q8BTV2 Gm5643-201ENSMUST00000117081 966 ntBASIC16.51■□□□□ 0.23
Cpsf7Q8BTV2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.51■□□□□ 0.23
Cpsf7Q8BTV2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.51■□□□□ 0.23
Cpsf7Q8BTV2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Cpsf7Q8BTV2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpsf7Q8BTV2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms